| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4440 |
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| Symbol | |
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| ID | 5834232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4942403 |
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| End bp | 4945846 |
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| Gene Length | 3444 bp |
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| Protein Length | 1147 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641370233 |
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| Product | double-strand break repair helicase AddA |
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| Protein accession | YP_001641879 |
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| Protein GI | 163853836 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.548671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.292809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCCC CGCTGACCGG CTTCACCGTC GATGACCTGA CCAAGGCGGC CCAGCGCAGG
GCCGCCGACC CGCGCCTCTC GGCCTGGGTC TCGGCCAATG CCGGCGCGGG CAAGACCAAG
GTGCTCACCG ACCGGGTGCT GCGCCTGCTC CTCGACGGCG CGCCGCCCGG CCGCATCCTT
TGCCTCACCT TCACCAAGGC GGCGGCTGCC AACATGTCGA TCCGCGTGTT CCAGCGCCTC
GGCCGCTGGG TGACGCTGGA CGATGCGGCG CTGACCGCCG AACTCACCGA ACTCACCGGC
GAGCGACCCG CCCGCGACAC CCTGCGGCTG GCCCGCCGCC TGTTCGCCCG CGCCGTCGAG
ACGCCGGGCG GCCTCAAGAT CGAGACGCTG CACGCTTTGT GCGAGCGGCT GCTGCACATG
TTCCCGTTCG AGGCCAACGT GCCGGCCCGC TTCGTCGTGC TCGACGACAA CCAGTCGCGC
GAGGCGTTCG AGATCGAGAC GGACAACGTG CTCGCCGATG CGATCCTCGG CGGCAACCAA
GCGCTGTCCG ATGCGCTCGC CGTGGTCGGC GCGGAAGCCT CCGGCGACAC CCTGCGCGAC
GCGATCCGCT CGGCCATGCG GACGCGGGCC CTGTTCTCGG ACCACCGTGC CCTGGAGCCG
GCGCTCGCCC GCCTGCCGCG CGCCCTGGCG CTGCCGGACG GCGCCAGCAT CGAGACCATC
GAGGCGGAGA TCCTGAAGGG GAGCAGCCTC GGCGATTGGC GCGAGATCGC GGGCCGGCTG
CGCACCGGCA AGGCGACGGA CGAGAAACTC GCCGACGGGC TCGTGGAGGC GCATGCCGCC
CTCGGCGCAG GCAAGGCGCT GGCGCCCTAC CGCTCGGTCT TCTTCACCGA CAAGGATGAG
CCGCGCGCGG CCAAATCCTT CGGCACCAAG GCGGTACCGG AGGACGTCAA GCAGGCGCTG
CTCGACGAGC AGGCCCGGCT GATCCCGCTC TTCGACGCGC TACGCGCCGC CCGCGCGCTC
GCCCGGACGC TGGGCCTGTT TCGGCTCGCC GCCGAAATCC ACCGCCGGGT CGAGGCGCAG
AAGACGCGTC TCGGCGCCCT CGATTTCGAC GACCTGATCC ACAAGACCCT CGACCTGCTC
TCGCGGGTCG GCGCCTCCTG GGTCCTGTAC AAGCTCGACC GCGGCGTCGA TCACGTCCTC
GTTGACGAGG CGCAGGACAC CAACCCGCAG CAATGGGAGA TCCTGCGCAC GCTCACCGCC
GAGTTCGCGG CGGGCGAAGG CGCGCGCGGC CTCACCCGCA CCCGCTTCGC CGTGGGTGAT
CCGAAGCAGT CGATCTACAG CTTCCAGGGC GCCGACCCGC GGGAATTCGA GCTGACCCGC
CGCGCCTGGG GCCGGGCGGC GGAGGGCGCC GGGCACGATT TCGCCGATGT CAGCCTGCGG
CTCTCGTTCC GCACCGCGAG CCATGTGCTT GCCGCGGTCG ATGCCGTATT CGGCGTGCCG
GATCATTTCG CCGGCCTCTC CTTCGATGCG GGCGCGCCGG GCACCGTCCA CGCCTCCGCC
CGCGCCGGCG TGCCCGGCGC GGTCGAACTG TGGGGGATCG AGGAGCCCGC GGAAGCCGAG
GAGCCCGATG CCTGGGCCGC CCCGGTCGAT GCGCCGGAGC CCAACGCGCC TGCCATCGTC
GTCGCCCGCC GCATCGCCCG CGCGGTGAAG ACCTGGACGA CGAAGGGCGA TGCCTGCGGC
CGGATCTGGC GCCCCGGCGA TGTGCTGATC CTGGTGCGCA AGCGCTCGGC CGCGTTCGAG
GAGGTGATCC GGGCGATGAA GGGGCTCGGC GTGCCGGTGG CGGGCCAGGA CCGGCTCGAG
GTCGCGGGCC ACATCGCCGT GCTCGATCTC GTCGCGGTCG GCCGCGCCGG GCTGCTTCCC
GCCGACGACC TGACGCTCGC CACCGCCCTC AAGACCCCGC TCGTCGGCCT CACCGACGAC
GACCTCACCC GCATCTGCGC CCGCCGCCCC TTCGCCGAGA CGCTGGAAGA CGCACTGACC
CGCCACGCGC AAGCCGGCGA CGGGGCGGCG ATCCGCGGTC TCGCGGCCCT GCGGCTCTGG
ATCCAACTCG CGGCGGAAAA CGGCCCGTTC GGCTTCTACG CCGCCCTGCT CGGCCCCCAT
GGCGGGCGCA GCCGGCTGGT GGCGCGGCTC GGCGGCGAGG CGGGCGATGC CATCGACGTG
TTCCTGGCCC AGGCCGCCGA CGCCGAGAAC GGGGGTGATG CCCCCTGCCT CGACGCCTTC
CTCGCCGATT ACATCGTCCG GCCCGGCCGC GGCCGAAGCG GTCTCTCGGT CAAGCGCGAT
CTGGAATCGG GCCGCAACGA GGTGCGCGTG ATGACGGTTC ACGGCGCCAA GGGCCTGGAG
GCGCCGGTCG TCGTCGTCAT CGATGGCTGC GAGCCGCTCG GCCGCAACGA CCCGCCGCTG
CTCGGCCTCG ACTCCACCGC CGAAGGGCCG CTGCCTCCGG TCTGGACCGG CGGGCGCACG
CAGGATTGCG CGGCGACGCT GGCCGCCCGC TCCGCCCTCC AGGCGCGGGC GCGGGAAGAG
CATAACCGCC TGCTCTACGT CGCCATGACC CGGGCCGCCG ACCACCTCGT CATCGCGCCC
TATCGCGGCG CGACCCGGGA GACGCCGGCC TCGTGGTGCG AGATGGTCCG CATCGGCCTG
GAGCGGGGGT TGGGGGACGG CGAAGCGGTC GAGACCGAGC ACGGGCCGAT CACGATCTGG
CGCGACGGTT CGGCCGCCTC GCTCGCCGCC GCCGCGGCGG ACACGGCCCC GCCGGAACCC
GAGACGGTGC CGGACTGGCT GTTCTCGGCT GCCGCGCCGG AGGCTGAGGC CGCGCCGCCG
CTGAGCCCCT CGGGCGCGCT CGGCGCGGCG GACGGGCAGC GCCAGCCCCG TCGGCGCCTC
GGTGATGCCG AGGCCCGCCG CCGCGGCGCC CTGGTCCACT CGCTTCTCGA ACACCTGCCG
CGGATCGAGC CGGCCCGGCG GGCCGAAGCC GCCGAGCGCT TCGCCCGTGC CCGCGCGCCC
ACTCTGGAGG AGGCCAAGCG CAAGGATCTC GTCCGCGCGG TTCTGCGGCT GATCGAGGCG
CCGGATCTCG CGCCGCTGTT CTCAGACCAG GCCCGTGCCG AGGTCGCGCT CTCGGGCCGG
ATCGTCGTCG AGGGGATCGA GCGCGACGTC ACCGGCCGGA TCGACCGGCT CGTCGTCGAG
GACGGCCGGG TGATCCTCTG CGACTTCAAG ACCGGCCGCC CGCCCGCGGA CGACGCGCCG
CTGCCGGAGC GCGAGGCGGC TCAGGTCAAC CTCTACGCGC GGCTGGCCGC CGCGATCTGG
CCCGAGCACG CGATCGTGGC GCTGCTGGTC TGGACCTCGG GGCCGGTGGT GCGGCGGGTG
GAGGGGGCTC GGCTCGGACA ATGA
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| Protein sequence | MNAPLTGFTV DDLTKAAQRR AADPRLSAWV SANAGAGKTK VLTDRVLRLL LDGAPPGRIL
CLTFTKAAAA NMSIRVFQRL GRWVTLDDAA LTAELTELTG ERPARDTLRL ARRLFARAVE
TPGGLKIETL HALCERLLHM FPFEANVPAR FVVLDDNQSR EAFEIETDNV LADAILGGNQ
ALSDALAVVG AEASGDTLRD AIRSAMRTRA LFSDHRALEP ALARLPRALA LPDGASIETI
EAEILKGSSL GDWREIAGRL RTGKATDEKL ADGLVEAHAA LGAGKALAPY RSVFFTDKDE
PRAAKSFGTK AVPEDVKQAL LDEQARLIPL FDALRAARAL ARTLGLFRLA AEIHRRVEAQ
KTRLGALDFD DLIHKTLDLL SRVGASWVLY KLDRGVDHVL VDEAQDTNPQ QWEILRTLTA
EFAAGEGARG LTRTRFAVGD PKQSIYSFQG ADPREFELTR RAWGRAAEGA GHDFADVSLR
LSFRTASHVL AAVDAVFGVP DHFAGLSFDA GAPGTVHASA RAGVPGAVEL WGIEEPAEAE
EPDAWAAPVD APEPNAPAIV VARRIARAVK TWTTKGDACG RIWRPGDVLI LVRKRSAAFE
EVIRAMKGLG VPVAGQDRLE VAGHIAVLDL VAVGRAGLLP ADDLTLATAL KTPLVGLTDD
DLTRICARRP FAETLEDALT RHAQAGDGAA IRGLAALRLW IQLAAENGPF GFYAALLGPH
GGRSRLVARL GGEAGDAIDV FLAQAADAEN GGDAPCLDAF LADYIVRPGR GRSGLSVKRD
LESGRNEVRV MTVHGAKGLE APVVVVIDGC EPLGRNDPPL LGLDSTAEGP LPPVWTGGRT
QDCAATLAAR SALQARAREE HNRLLYVAMT RAADHLVIAP YRGATRETPA SWCEMVRIGL
ERGLGDGEAV ETEHGPITIW RDGSAASLAA AAADTAPPEP ETVPDWLFSA AAPEAEAAPP
LSPSGALGAA DGQRQPRRRL GDAEARRRGA LVHSLLEHLP RIEPARRAEA AERFARARAP
TLEEAKRKDL VRAVLRLIEA PDLAPLFSDQ ARAEVALSGR IVVEGIERDV TGRIDRLVVE
DGRVILCDFK TGRPPADDAP LPEREAAQVN LYARLAAAIW PEHAIVALLV WTSGPVVRRV
EGARLGQ
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