| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4388 |
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| Symbol | |
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| ID | 5835099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4881719 |
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| End bp | 4882918 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641370182 |
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| Product | integrase family protein |
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| Protein accession | YP_001641828 |
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| Protein GI | 163853785 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.754595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.599822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGGA TCTATCTCCG TGGGAAAACG TGGTGGGGCC GCGTCCAAAA GGACGGCCAA
GATCTCCGGC AATCCCTCGA GACGCGATCT GAAAGCGTCG CGCGCGGCCG TCTTAAGGTC
TGGCTCGACG AGCTAGAGAC GCTGGCCTGG GGCGGAAAGC CCCGGCTCAC AGTCAACGCG
GTGATGGACG AGTTCCAGAA GGAGCATGGG CCGACACTTC GCCCGAGCAC GGTTCGGCGC
TATGGCGTGT CGATCGACCA TCTCGACGCA TTCCTCGGCG ACAAGCTGCT TCTCTCCGTC
CGATCTTCGG ACCTGAAGGA CTTCGAGACC GCGCGCCGGA CCGCGGGCGC CTCGGCGCCG
ACCGTGCGCC GGGATCTGGC CTGCCTCTCG ACTGTGTTCG GCTTCGCGAT CGAGAAGGAA
TGGGCCGACA TCAACCCGGT GATCCCGTTC CTGCGGCAGC GGGCCAAGCG CGGCCTGCGC
GAGAGCCCTC CCCGCACGCG CTACCTGACC CGAGCGGAAG AGGCTCGCCT GATCGAGAGC
GCCCTCCCCT ATGTGGCCGA CGCGATCCTG TTCGCGATCT ACACGGGCCT GCGACAGGAG
GAGCAGTTCT CGCTCACCTG GGAGCAGGTC GATCTTGCCC GCAAGCACGT CACGATCTCG
GCCGAGACCG CGAAGGGCAA GCGCGAGCGG ACGGTGATCC TGCTCGCTCC GGCCCTCGCG
GTGCTGAAGC GCATCCCGCG GCACCTGCAG AGCCCGTTCG TCTTCCACCA CGGCGCCGCC
ACCACGACGC GCGGGGCCCG GCGCGCCCTC CCCTCGACCA GCACGAAGAA GGACAACGAC
GGCGAGCGGT TCAACCATCT CGACCGCGGG CTGCGGAACG CGGCCAAGCG GGCCAAGGTG
CCGCTGCTGC GCTGGCACGA CCTGCGGCGC ACCCACGGCT GCCGGCTGTT GCAGGAGGAG
AAGTGGACGC TGGAGATGGT GCGCGACCAG CTCGGTCACC GGAGCGTCGT CCAGACCGAG
CGTTCCTATG CCTTCCTCGA GGTCGAGGAC CGGCGCATGG CCGCACACGG GCCCGGCACA
AATCCCGGCA CAGCCGCCGC GCAGGAGATC GACAACGCGA CGGGCGAACC GATCACAGCA
CAAAAGCCGG CACAGGGGCG GCGGACTGAT CTGGAAAAGC TCACGAAATC AACGGCGTAA
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| Protein sequence | MAGIYLRGKT WWGRVQKDGQ DLRQSLETRS ESVARGRLKV WLDELETLAW GGKPRLTVNA
VMDEFQKEHG PTLRPSTVRR YGVSIDHLDA FLGDKLLLSV RSSDLKDFET ARRTAGASAP
TVRRDLACLS TVFGFAIEKE WADINPVIPF LRQRAKRGLR ESPPRTRYLT RAEEARLIES
ALPYVADAIL FAIYTGLRQE EQFSLTWEQV DLARKHVTIS AETAKGKRER TVILLAPALA
VLKRIPRHLQ SPFVFHHGAA TTTRGARRAL PSTSTKKDND GERFNHLDRG LRNAAKRAKV
PLLRWHDLRR THGCRLLQEE KWTLEMVRDQ LGHRSVVQTE RSYAFLEVED RRMAAHGPGT
NPGTAAAQEI DNATGEPITA QKPAQGRRTD LEKLTKSTA
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