Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4365 |
Symbol | |
ID | 5831127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4856954 |
End bp | 4857859 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641370158 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001641805 |
Protein GI | 163853762 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.822927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCCA TGACCGGATC ACTGGAAAAC TTGACCGTTC TTCCGGACGC CGGACCGGGC GTCTCCGGCG ACCTGCTTTC GCACGTACTG GCGCAGATCC GGCTCACCGG GGACCATGTC CGGTCACACG AAGTCGCGTG GTCGAAGGGC TTGGACCTGG AAGCCGAAGC CGCCCATGTC CTGGTGGTCG CCGACGGCTC GCTCGACGTC GAGGACGATG GCGGGGAGCG CGTCGTGATC GACACGGGCG ATCTCGTGCT TCTGCCCCGC GGGCTCGGAG GGTCCAGGCT GGTGGCGTCC GCCTCGCACG CATCGGTGAT CGTCTGCCGG TTCTCGTTCG ATCCCCAGAG CCTTCGCGGC ATGATCTCGG CCCTGCCCGG GCGCATCCAC ATCCGGCGCG CCGAAGGAGC CGGGTGGCTT GACGGCATCG TACCCTTCCT GATGGTCGAG GTGACTGACG ACGAGCCCGG CGCGGCCCTA ATGATCTCAC GGATCATCGA CGTCATCGTC ATCCGCACCT TACGGACCTG GGTGCAGCAC GGGCACACCA CCGGATGGCT GGGAGGGTTG TCCGACGCCC GCATCGCCCG AGCGTTGAAG GTCATACACG AGCGACCACT GCAGCGCTGG AGCGTCGACA CCCTGGCCGA CGCGGCCGGC ATGTCCCGGT CGAGCTTCTG CGAACGTTTC GCCGCGCTCG TCGGGCGCTC GCCACTGCGC TACCAGAACG AGTGGCGGCT CACGCTCGCC CGGAACATGC TCGTCGCCCG CGAGGCACGT GTCGGCGAGG TCGCACTACG GGTCGGCTAT GAGTCCGAAG CAGCGTTCAG CCGTGCTTAC AAGGCGATGT TCGGCCATCC ACCGAGGGAC GAGCCTGCAC TGCCGAGCGG ACGTCTCGGC CGGTAG
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Protein sequence | MAPMTGSLEN LTVLPDAGPG VSGDLLSHVL AQIRLTGDHV RSHEVAWSKG LDLEAEAAHV LVVADGSLDV EDDGGERVVI DTGDLVLLPR GLGGSRLVAS ASHASVIVCR FSFDPQSLRG MISALPGRIH IRRAEGAGWL DGIVPFLMVE VTDDEPGAAL MISRIIDVIV IRTLRTWVQH GHTTGWLGGL SDARIARALK VIHERPLQRW SVDTLADAAG MSRSSFCERF AALVGRSPLR YQNEWRLTLA RNMLVAREAR VGEVALRVGY ESEAAFSRAY KAMFGHPPRD EPALPSGRLG R
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