Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4267 |
Symbol | |
ID | 5834548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4748913 |
End bp | 4750778 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641370058 |
Product | ABC transporter related |
Protein accession | YP_001641707 |
Protein GI | 163853664 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.183783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.517303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCG TCAACGATCT CACCTACCGC ATCGGCGAGC GGGTCATCCT CGATTCTGCG ACCTTCGCGA TTCCCGACCG GGCGCGGGTC GGCCTCGTCG GCCGCAACGG GGCGGGCAAG ACCACCCTGT TCCGGGCGAT CCTCGGCGAG TTGCCGACCG ATGCCGGCGC GGTCTCCCTG CCCAAGGGCA TGCGCATCGG CGCGGTGGCG CAGGAAGCGC CGGCCGGCCC CGAGACCCTG CACGAGGTCG TGCTCGCCGC CGACACCGAG CGCTCTCGGC TGATGCAGGA GGCGGAGCAC GCCGACGGGC TGCGCCGTGC CGAGATCGAG ACGCGGCTCG TGGATATCGG CGCCCATTCG GCCCCGGCCC GCGCGGCGGC GATCCTGCAC GGCCTCGGCT TCGATGCGGC AGCGCAAGGC CGTCCCTGCT CGGACTTCTC CGGCGGCTGG CGGATGCGGG TGGCGCTCGC TGCGGTGCTG TTCTCCGAGC CCGACCTGCT GCTTCTCGAC GAGCCCACCA ACTACCTCGA CATCGAGGGC ACGCTCTGGC TCTACGACTA TCTCGAGAAG TACCCCCGCA CGGCCGTCAT CATCAGCCAC GACCGGGAAT TGCTCGACAC ATCCGTCGAT CACATCCTGC ACCTGGATCG GGGCAAGCTC ACGATCTACC GCGGCGGCTA TACCAGCTTT GCCCGTCAGC TCTCCGAGAA GCGGGTGCTG CAGGCCAAGG CGAAGGCCAA GCAGGAGGTC GAGCGGGCGC ATCTGCAGAG CTTCATCGAC CGCTTCAAGG CCAAGGCGAC CAAGGCGCGC CAGGCCCAGT CGCGGATGAA GCGGCTCGCC AAGATGGAGC CCATCGCCGC GCTCTTGGAA GACGACGTGC CGGTGATCCA CCTGCCGAGC CCGGAAAAGC CGCTCTCGCC GCCGATCGTG GCGATGGAGC GCGTCCAGGC CGGCTACGGC GAGCGCATCG TGCTCTCGGG GCTCAACCTG TCACTGGCCC CCGACGACCG GGTGGCGCTG CTCGGCGCCA ACGGCAACGG CAAGTCCACC TTCTGCAAGC TGATCGGCGG GCGGCTGCCC CCGCTCGCGG GCGAGATGCG GCGCTCCTCC AAGATGGAGG TCGCCTATTT CGCGCAGCAC CAGCTCGACG AGCTGCGCCC GTCCGAGAGC GCGGTGGCGC ATGTGCGCGA CCGCATGCCC GACGCGCCGG AGGCCAAGGT GCGCTCGGCC GCCGCCCGGC TGGGCTTCCC AGCCTCGAAA GCCGACACGC CGGTGGAGAA ACTCTCCGGC GGCGAGAAGG CGCGGCTCCT GATGGGGCTC GCCGCCTTCG ACGGGCCGCA CCTGCTGATC CTCGACGAGC CGACCAACCA CCTCGATATC GAGAGCCGGC AGGCTCTGGT GGAGGCGATC AACGATTACG AGGGGGCGGT GATCCTCGTT TCCCACGACC GCTTCCTGAT CGAGGCCTGC GCCGACCGGC TCTGGATCGT CGGCGACGGC TCGGTGAAGT CCTTCGACGG CGACATGGAC GATTACCGCC GCCTCGTGCT CGCCGGCCCG GAGCGGGTGG ACACGTCCGG CGAAGGCACC GGGGGGCAGA AGGCCGAGGC GCGCCGCTCG GCGGTGGAGC GTCGCGCGGC TCTGGCGCCG CTGCGCAAGC GCCTCGACGG CATCGAGGCG CGCATGGCCA AGCTCTCGGC GGCGATCGAG AAGATCGACG CAGCCTTGGC CGACGGCACG GCCTTCCTCA AGGACGCGGC CAAGGCCGGC GACATCGCCC GCATGCGTGC CGAGGCCGCC GAGGCCCTGG CCAAGGCCGA GGAGGAATGG CTGGAGGTGA GCGGCGAGAT CGAGGCGGCG GCCTGA
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Protein sequence | MLRVNDLTYR IGERVILDSA TFAIPDRARV GLVGRNGAGK TTLFRAILGE LPTDAGAVSL PKGMRIGAVA QEAPAGPETL HEVVLAADTE RSRLMQEAEH ADGLRRAEIE TRLVDIGAHS APARAAAILH GLGFDAAAQG RPCSDFSGGW RMRVALAAVL FSEPDLLLLD EPTNYLDIEG TLWLYDYLEK YPRTAVIISH DRELLDTSVD HILHLDRGKL TIYRGGYTSF ARQLSEKRVL QAKAKAKQEV ERAHLQSFID RFKAKATKAR QAQSRMKRLA KMEPIAALLE DDVPVIHLPS PEKPLSPPIV AMERVQAGYG ERIVLSGLNL SLAPDDRVAL LGANGNGKST FCKLIGGRLP PLAGEMRRSS KMEVAYFAQH QLDELRPSES AVAHVRDRMP DAPEAKVRSA AARLGFPASK ADTPVEKLSG GEKARLLMGL AAFDGPHLLI LDEPTNHLDI ESRQALVEAI NDYEGAVILV SHDRFLIEAC ADRLWIVGDG SVKSFDGDMD DYRRLVLAGP ERVDTSGEGT GGQKAEARRS AVERRAALAP LRKRLDGIEA RMAKLSAAIE KIDAALADGT AFLKDAAKAG DIARMRAEAA EALAKAEEEW LEVSGEIEAA A
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