Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4119 |
Symbol | |
ID | 5833972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4577992 |
End bp | 4579584 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641369910 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_001641560 |
Protein GI | 163853517 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.442292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.809833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGGAA GCTTCCGCCA GTCGATGGCG TGGCTGCACA CGTGGTCCGG CCTGATCGTC GGCTGGGTGC TGTTCGCGAT CTTCGTCACC GGCACCGCGA GCTACTACCG GCCGGACATC TCCCGCTGGA TGCGCCCCGA ATTCACGCGC GTCGAGCCGG TGGAGGCGGC CGCCCTCGGA GCGGCGACCG AGCATGCAGT GGCCTATCTC GGCCAGCACG CGGCCAAGGC CCGGACCTGG TTCGTCGGCC TGCCGCAGCC CGACAAGCCG GTGCTCGACC TGTTCTGGCG CACCCGGCCG GGCGAGCGTC CGGGCCATGT CCTGCTCGAT CCGCGGACCG GGACCGAGTC CACCGTGCGC GACACGCAAG GAGGCGACTT CCTCTACCGC TTCCATTTCG AGCTGCACAT GCCGCCGCTC TGGGGGCGCT GGGTCGTCGG CCTCTGCGCG ATGATCATGC TGGTGGCGCT GATCTCCGGC ATCGTCACCC ACAAGCGGAT CTTTGCCGAC TTCTTCACCT TCCGCCGCGA CAAGGCGCCC CGGCGCAGTT GGCTCGACGC CCACAACGTC ACCGGCGTGC TGGCGCTGCC GTTCCACGTG ATGATCACCT ATACCGGGAT CGTCACCCTC GCGACGTTCT ACATGCCCTG GGGCGTGAAC ACCGCCTACA AGGGCAACGC CCAGACCTTC TTCACCGAGG CCAACTGGAT CACGACGCCG CGCCCGCCCG CGAAGCAGGC TGCCGCGCTC GCCCCGCTCG GGCCGATCGT GGAGCGGGCG GTCGCGGCCC GGCCGGAGCC GCTGGAGCGG CTCACGATCG TCAATCCGGG CGACGCCAAC GCCACCGTGG TCGCGGTGTT CGAGGAGCCG CACGGCCTCT CGCACGAGCA TCCGCAGATC GCCTTCGACG GGGTGAGCGG CGAAATCCTC GAGGTCCGCG ACGGCGGCCT CAAGCCCGCG GCCAAGACCT TCACGGTGAT GACCGGCCTG CACGAGGCGC ACTTCGCCGG CACCCTGCTG CGGCTGGTGT TCTTCCTGTG CGGGATCATG GGCTGCGCCA TGGTCGCGAC CGGCGTCGTG CTCTGGTCGC TGGCCCGCCT GCCGAAGCCG GGGGAGCGGC CCTTCTTCGG CCTGCGGCTG GTCCAGGCGC TGAATGTCGG CAGCATCGCC GGCCTGCCGG CGGCCATCGC CTGCTTCTTC ATCGCCAACC GGCTCCTGCC CGTCGGTCTC GCCGGGCGCG AGGATTGGGA GATCCGCGTC TTCTTCGGCG CCTGGATCGT CGCGGCTCTG GTGCCGCTCG TCCGTCCGCA GCGCCGGGCG TGGTGCGAGG GTCTGGCCGC CGTGTCGGTG CTCTGCGTCG CGGTGGTCGC AGCCGACATC CTGACGATCC CCGACCATCC CCTGCGGCTG GGCGGCGGCG ACCCGCTCTT CGTCTGGTTC GACGGGGCGA TGCTGCTGCT CGCAGCCCTG TTCGCCGTCG CTTCCCGCAA GATCCTGCGC TACGAGGCGC CCAAGCGCGC TGCGAAGCCG GCCCCGGTTC CCGCCTCCCC CGCCCGCCAG CCCGCGCGGC GCCCCGAGCC GACCCACGCA TGA
|
Protein sequence | MKGSFRQSMA WLHTWSGLIV GWVLFAIFVT GTASYYRPDI SRWMRPEFTR VEPVEAAALG AATEHAVAYL GQHAAKARTW FVGLPQPDKP VLDLFWRTRP GERPGHVLLD PRTGTESTVR DTQGGDFLYR FHFELHMPPL WGRWVVGLCA MIMLVALISG IVTHKRIFAD FFTFRRDKAP RRSWLDAHNV TGVLALPFHV MITYTGIVTL ATFYMPWGVN TAYKGNAQTF FTEANWITTP RPPAKQAAAL APLGPIVERA VAARPEPLER LTIVNPGDAN ATVVAVFEEP HGLSHEHPQI AFDGVSGEIL EVRDGGLKPA AKTFTVMTGL HEAHFAGTLL RLVFFLCGIM GCAMVATGVV LWSLARLPKP GERPFFGLRL VQALNVGSIA GLPAAIACFF IANRLLPVGL AGREDWEIRV FFGAWIVAAL VPLVRPQRRA WCEGLAAVSV LCVAVVAADI LTIPDHPLRL GGGDPLFVWF DGAMLLLAAL FAVASRKILR YEAPKRAAKP APVPASPARQ PARRPEPTHA
|
| |