| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4107 |
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| Symbol | |
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| ID | 5832572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4569163 |
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| End bp | 4570926 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641369898 |
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| Product | PAS sensor protein |
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| Protein accession | YP_001641548 |
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| Protein GI | 163853505 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0206968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTG AGCCCGGCGC CACGGCTTTG GACGAGGCGC AGGCGCGCAT CCGCGCGCTG
GAAACGCGGC TGGAGGAGGT CGAGGACACC CTGGCGGCGA TCCGCCGGGG CGATTTCGAT
GCGATCGTGG TCGAGGGTCC GGGTGGCGAG CGCCTGGTCT ACACCCTGGA GAATGCCGAC
CGGCCCTACC GGGTGCTGAT CGAGCAGATC CAGGAGGGCG CCTTCACCCT CGGGCCGGAC
GGAACACTGC TCTACTGTAA CCGCCGGCTC GCCGAGACCC TGGGCACTCC GCAGGAGCGC
CTGATCGGCC AGCCCTTCGC GCGCTTCGCC GCCGGGGGCC AGGACGCGGC GCTCGCCGCT
CTGATCACGC AGGCGGCGCG GATGCCGGCC CGCGGCGAGA TCGCCCTGTG CGACGAGGCG
GGGGTCGAGC GCCCCGCCTA CCTGTCGCTG AACCGCCTCG ACGGCGACGG CGACACCCTG
CTCCTTTGCG GCGTGATCAC CGACCTCACG GCGGAGCGGC TGCGCCTGCA CGAGCTCGCC
GAGGCCAACG AGCGCCTGCG CGCCGAGGTG GCCGAGCGCG AGCGGATCGA GGAGGCATTG
CGCCAGAGCC AGAAGATGGA GGCGGTGGGC CAGCTCACCG GCGGCGTCGC GCACGACTTC
AACAACCTGC TCACCGTCAT CAAGTCCTCC ACCGATCTGC TCAAGCGCCC CGATCTCGCC
GAGGAGCGCC GCCGCCGCTA TGTCGACGCC ATCTCCGACA CGGTGGCACG GGCGGCCAAG
CTGACCGGCC AGCTCCTCGC CTTCGCCCGG CGCCAAGCCT TGAAGCCCGA GGTGTTCGAT
GCCGGCCGCG GCGTCGCGTC GGTGGCCGAC ATGGTCGGCA CGCTCACCGG CGCGCGCATC
CAGGTGAAGA CCCTGATCGA GCCCTGTTTC GACGCCGCGG GCGAGCCCTT CGCCTGCCTC
GTGGAGGCCG ATCCGAGCCA GTTCGACACG GCGCTCGTCA ACATGGTCGT CAACGCCCGC
GACGCCATGG ACGGCGAGGG CACGCTCACC ATCCGCGTCG GCCATGCCGG GCAGATTCCG
GCCCTGCGCA CCCATCCGGC CGTGCCCGGT GACTTCGTGG CGGTGGCGAT CTCCGACACG
GGGACGGGCA TCGCGCCCGC CGACCTGTCG CGGATCTTCG AGCCGTTCTT CACGACGAAG
GGCGTCGGCC AGGGCACTGG GCTCGGGCTG TCCCAGGTGT TCGGCTTCGC CAAGCAATCG
GGCGGCGACA TCGCGGTGGA GAGCGTGCTG GGACAGGGCA CGACCTTCAC CCTGTTCCTG
CCGCGGGCCA AGGTCGCCCC AACGATGGTC GAGTCCGCCG ACGAGCCCGA GCCGCTAGCC
CCCGGCCACG GCACCTGCGT GCTCCTCGTC GAGGACAACC GCGAGGTCGG CGCCTTCGCG
ACGCAAGCGC TGGCCGAACT CGGCTACGGC ACCGTCTGGG CGATGGATGC GGAGCAGGCG
CTGGCCGAGC TCGACCGGAC GCCGGAGCGC TTCGACGTGG TGTTCACCGA CGTGGTGATG
CCCGGCATGA ACGGGGTCGA ACTCGCCCGC ACGATCCTGG GGCGGACGCC CGGCATGCCG
ATCGTGCTCT CCTCCGGCTA CAGCCACGTG CTGGCCGAGG ACGGGCACCA CGGCTTCCCG
CTGCTGCACA AGCCCTACTC GGTGGAGGAT CTCTCGCGCA TCCTGCGTCG GGCGATCCAG
CGGCGCGCCG CGCGGGCGCG GTGA
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| Protein sequence | MSTEPGATAL DEAQARIRAL ETRLEEVEDT LAAIRRGDFD AIVVEGPGGE RLVYTLENAD
RPYRVLIEQI QEGAFTLGPD GTLLYCNRRL AETLGTPQER LIGQPFARFA AGGQDAALAA
LITQAARMPA RGEIALCDEA GVERPAYLSL NRLDGDGDTL LLCGVITDLT AERLRLHELA
EANERLRAEV AERERIEEAL RQSQKMEAVG QLTGGVAHDF NNLLTVIKSS TDLLKRPDLA
EERRRRYVDA ISDTVARAAK LTGQLLAFAR RQALKPEVFD AGRGVASVAD MVGTLTGARI
QVKTLIEPCF DAAGEPFACL VEADPSQFDT ALVNMVVNAR DAMDGEGTLT IRVGHAGQIP
ALRTHPAVPG DFVAVAISDT GTGIAPADLS RIFEPFFTTK GVGQGTGLGL SQVFGFAKQS
GGDIAVESVL GQGTTFTLFL PRAKVAPTMV ESADEPEPLA PGHGTCVLLV EDNREVGAFA
TQALAELGYG TVWAMDAEQA LAELDRTPER FDVVFTDVVM PGMNGVELAR TILGRTPGMP
IVLSSGYSHV LAEDGHHGFP LLHKPYSVED LSRILRRAIQ RRAARAR
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