| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4103 |
|---|
| Symbol | |
|---|
| ID | 5832568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 4564723 |
|---|
| End bp | 4565385 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641369894 |
|---|
| Product | regulatory protein TetR |
|---|
| Protein accession | YP_001641544 |
|---|
| Protein GI | 163853501 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.557347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGTG CGGCGACACA GGAGCGGGGG CCGGCGGCCC CGCAAGCAAC CCTATCGGGC
GAGAGCGACA AGCGCCGGCA GATCCTGGAG GGCGCGCGTC AGGTGTTCAT GGCGTCGGGC
TTCGACGGGG CCAGCATGGG CGAGATCGCC AAGACCGCGA ACGTCTCGAA GGGCACGCTC
TACGTCTATT TCGACAGCAA GGAAGCCCTG TTCGAGGCCC TGACTACCGA GGCGAAGGCG
GGTCTGGCCG AGAACCTGTT CCGGCTCGAC GAGGACGACC CGGATGTCCG CGCCGTGCTG
ACGCGGCTCG GGACCAGCTA TCTCACGATG ATGGCGCGGC CGGAGCACGT CTCGATCATC
CGCATGGTGA TGGGCGCCTG CGAGAAATTC CCCCGGTTCG GGCAGGCCTT CTACGAGGCC
GGCCCGGCCT GCGGGGTCGG ACGGCTGAAA GCCTATATCG ACGCCCAGGT CGCCGCCGGG
CGCCTGCGCG CTGACGATAC CGATCTTGCC GCCAAGCACT TCCTCCAGCT CTGCCAGGCG
GGAATGCTGA CGCGCCTGCT GTTCAATGTC GGGCAGGCAC CCGACGAGGA CGAGATCCGG
CACCGGGTCG CGGAGGCGGT GCGGGTGTTT TTCGCGGGGT ATGGCCCCGG CGCGGAGCGC
TGA
|
|---|
| Protein sequence | MAGAATQERG PAAPQATLSG ESDKRRQILE GARQVFMASG FDGASMGEIA KTANVSKGTL
YVYFDSKEAL FEALTTEAKA GLAENLFRLD EDDPDVRAVL TRLGTSYLTM MARPEHVSII
RMVMGACEKF PRFGQAFYEA GPACGVGRLK AYIDAQVAAG RLRADDTDLA AKHFLQLCQA
GMLTRLLFNV GQAPDEDEIR HRVAEAVRVF FAGYGPGAER
|
|---|
| |