Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4071 |
Symbol | |
ID | 5831068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4527603 |
End bp | 4529774 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641369862 |
Product | ABC transporter related |
Protein accession | YP_001641512 |
Protein GI | 163853469 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0571162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGCCTGC TGTCGGATCT TCAGTTCGGT TTCCGGCGGC GCCTGCCGGT CGTGCTCCAG GCGGAGGCTG CCGAGTGCGG CATGGCCTGC CTCGCCATGG TGCTGGGCTA CCACGGCCGC CGGGTCGATC TCGGAAGCTT GCGCGCGCGC CACGCCCTCT CGCTGAAGGG CATGACGCTG CGAAACCTCA TGGACCTCTC CGGCACCCTG GGGCTCTCGA CGCGGGCGCT GCGGGTGGAA CTGCCCGATC TCGGCCGCCT GCGCCTGCCC TGCATCCTGC ATTGGGGGCT CAACCACTTC GTCGTGCTGG CGCGGGTCGG GCGCCGGGAG ATCGTGATCC ACGATCCCGC CCGCGGGCGC CGCACCCTGA GCCTCGCGGA AGCCTCGCGC GAATTCACCG GCGTCGCCCT GGAGGTGGCG CCGAACCAGA GCTTCGTGCG CGAGCGGGCG GCGCGCGGCC TCGCGCTCTC CGACCTGTTC CGGGGCATGG CCGGCATCCG CGCGGCGATG ATGCAGATCC TGGCCCTGTC GCTCGGGATC GAACTCGTGG CGATCCTGAT GCCGATCGCC TCGCAGATCG TCATCGACGA GGTGATCGTG AACGGCGACC TCGACCTGCT GCTCGTCGTG GCGCTCGGAC TCGCCCTGCT GCTCGTGCTG CAACTCGGGC TCGGCGTCGC CCGAAGCTGG GCGATCATGC TCACGGGCAC GAAGCTGAAC TACCAGTGGT CGGGCTCGTT GTTCGACCAC CTCTCGCGGC TGCCGCTCGA CTATTTCCAG AAGCGGCATG TCGGCGACGT GATCTCGCGC TTCGGCACGC TGGCCACGAT CCAGAAGGGC ATCACCACCG ACCTCGTCCA GGCCCTGCTC GACGGGCTGA TGTCGGTCGG CATGCTGATC ATGCTGTTCC TCTACGGCGG CTGGCTCGCC CTGGTGGCCA TCGCCGCCAC CGCGCTCAAC GCCGGCTTAC GGATCGCCGC CTACAAGGCC TATCGCGAGG GCACGGAGGA GGCGATCGTC GCGGAGGCGC GCCAGCAGAG CCACTTCATC GAGACCGTGC GCGGCATGGC GAGCGTCAAG CTCCTGAACC TGCGCGAGCG CCGCCGCGGC ACCTGGATGA ACCAGTTCGT CCAGGCGCTG AACGCCCGGC TGCGGCTGCA GCGGCTCGAC CTCGTGTTCG GGCGCGGCAA CGAGTTCCTG TTCGGCGCCG ACCGGCTGAT CCTGCTGGTG CTCGGCGCGC GCGCCGTGAT CGACCAGTCG ATGACGCTCG GCATGCTGGT CGCCTTCCTC GCCTATCGCG ACCAGTTCTC GACCCGCATC GGCAACCTGA TCCAGTCGGG CTTCCAGCTG CGGATGCTCA ACGTGCAGAC CGACCGGCTC TCGGACATCG TCATGACCGA GCCGGAGGAG GCCGCCGCAC CCATGCCCGT CGCGGCGGCG CCGATCGCGG CCCCCGCCCT CCTTCCCTCC GGCGAGCGTC CGCCGGTGCG CGGCGCGGGC TTGCGCGCCG TCGGCCTGTC CCTGCGCTAC GGCGACGACG AGCCCTGGGT GTTCCGCAAT CTCGGCCTGG CGGTGCCGCC GGGCGAAAGC CTCGCCATCA CCGGCTCCTC GGGCTGCGGC AAGAGCTCGG TGATGAAGAT CCTGATGGGT CTGCTGCCGC CCTCCGAAGG CGCGGTGCTG GTCGATGGCC GCGATATCCG CTCCGGAGGG TTGGCGGCCT ACCGCGCCCG CATCGCCGGA GTGATGCAGG ATGACGGGTT GTTCGCCGGC TCGATCGCCG AGAACATCGC CTGTTTCGAC GAGCGGCCCG ATCCCGGCTG GATCCGCGAA TGCGCCGCCC GCGCGGCGAT CCTCGACGAC ATCGCCCGCA CGCCGATGGG CTTCGAGACC CTGGTCGGCG ACATGGGCTC GACCCTCTCG GGCGGCCAGC GCCAGCGGGT GATCCTCGCC CGCGCCCTCT ACCGGCGGCC GGAGATTCTG TTTCTCGACG AGGCGACGAG CGCGCTCGAC GAGCCGACCG AGGCGGTCAT CGCCGCCGCG CTGCGCGACC TGAAGATGAC GCGGGTCATC GTCGCCCACC GTCCGGCGAC CGTGGCCCAT GCCGACCTGC GCTACGATTT TTCCGCGGAG GCACCGCGGG TCGAGCCTCA GGCGACGGAG ACCGCCGGTT GA
|
Protein sequence | MSLLSDLQFG FRRRLPVVLQ AEAAECGMAC LAMVLGYHGR RVDLGSLRAR HALSLKGMTL RNLMDLSGTL GLSTRALRVE LPDLGRLRLP CILHWGLNHF VVLARVGRRE IVIHDPARGR RTLSLAEASR EFTGVALEVA PNQSFVRERA ARGLALSDLF RGMAGIRAAM MQILALSLGI ELVAILMPIA SQIVIDEVIV NGDLDLLLVV ALGLALLLVL QLGLGVARSW AIMLTGTKLN YQWSGSLFDH LSRLPLDYFQ KRHVGDVISR FGTLATIQKG ITTDLVQALL DGLMSVGMLI MLFLYGGWLA LVAIAATALN AGLRIAAYKA YREGTEEAIV AEARQQSHFI ETVRGMASVK LLNLRERRRG TWMNQFVQAL NARLRLQRLD LVFGRGNEFL FGADRLILLV LGARAVIDQS MTLGMLVAFL AYRDQFSTRI GNLIQSGFQL RMLNVQTDRL SDIVMTEPEE AAAPMPVAAA PIAAPALLPS GERPPVRGAG LRAVGLSLRY GDDEPWVFRN LGLAVPPGES LAITGSSGCG KSSVMKILMG LLPPSEGAVL VDGRDIRSGG LAAYRARIAG VMQDDGLFAG SIAENIACFD ERPDPGWIRE CAARAAILDD IARTPMGFET LVGDMGSTLS GGQRQRVILA RALYRRPEIL FLDEATSALD EPTEAVIAAA LRDLKMTRVI VAHRPATVAH ADLRYDFSAE APRVEPQATE TAG
|
| |