| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4051 |
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| Symbol | |
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| ID | 5833164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4507558 |
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| End bp | 4509909 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641369842 |
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| Product | PAS sensor protein |
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| Protein accession | YP_001641492 |
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| Protein GI | 163853449 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.688401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAA GTCTTCCCTC TCCCGTGCCA TCCGACGCCG AATCGGCGCG CTTTCGGATC
CTGGAGCCGT TGCGGGCGGC GCAGGAACAG CTCGCCCGCG TGCAGGATGC CGCCGGGATC
GGTGTCTTCA CCCTCGACCT GCGCGAGGGC GTGCTGCATC CGAGCCCCGC CTTCTGCCGC
CTGCACGGCT TGGAGGTGCG CGAGCGGTAC GCCCTCGCCG CGCTCGCCGA GCGCTTCCCG
GCGGAGGATA CGGCGATCCC CTCGGGTACG TCCTCCGAGG AGGCGGTCTA CCGCGTCCGC
GATTCCCGGA CCGGGGCGTC GCGCTGGATT GCCCGCACCC TCGAGATCGA GCGCGATGCG
GACGGCGCGG CCCTGCGGCT GGCGGGCGTG GTGCGGGACG TGACCGAGCA GCGGGCCCAG
GGCACGGCGC TGGCCGAGAG TGAGCAGCAC TACCGCACGC TGTTCGAGCA GATGGACGAG
GGCTACTCCG TCATCGAGTT CATCGATGGC CCGCACGGCC CCTTGAGCGA CTACGTCCAC
GTCACCGCCA ACCGCGCCTA CGCCCAGCAT GCCGGCATCG AGAACGTGGC CGGCAAGCGC
CTGCGCGAGA TCGTCGGCGA GGAGGCCGAG GGCTGGCTCG CGCTCTACGG CGACGTCCTG
CGCACCGGCC GGCCGATCCG CTTCCAGCGC GAGCTGGTCG CCACCGGGCG CTACCTCGAA
CTCGCCGCCT TCCGCATCGA ACCGCCGTCG CGGCGGCAGG TCGCGGTGCT GTTCCAGGAC
ATCACGGCCC GGCGGCGCGT GGAGCACCTG CTCCATTCCA AGGCTGCCGA CCTGGAGGCG
GAGGTGGTGG CGCAACGGCG CGACCGCGAC CGCGTCTGGA CGCTCTCGCC GGTCCTCAAG
GTCGTGGCCA CCCCCGACGG GCGGATCGAG GCGGTGAACC CCTCGTGGGG TCGGACGCTG
GGCTGGTCGC CGGCCGAGAC GGTGGGCCGC TACGTGCCTG ACTTCTTCGC GCCCGAGGAG
CGCGCGACCG CCGAAGCGGC GCTGGAACGG CTCGCGGCCG GCGCCTCGAC CGATCTCGAA
CTGACCTGCC TGACCAAGGA CGGCGGCACC TGCCGCGTGC TGTGGACCAT CGTGCCGGCC
GACGGCCTGC TCTACGGCTT CGGCCGCGAC ATCACCGAGC AGCGCCACGC GGAGGAGGCC
CTGCGCCAGT CGCAGAAGCT GGAGGCGGTG GGCCAGCTCA CCGGGGGCGT GGCCCACGAC
TTCAACAACC TGCTCACCAT CATCCGCTCC TCGGTCGAGT TCCTGCGCCG GCCCGACCTC
GCGCCCGAGC GCAAGCGCCG CTACCTCGAC GCGGTCTCCG ACACGGTGGA CCGGGCGGCG
AAGCTGACGG GCCAACTCCT CGCCTTCGCC CGGCGGCAGG CGCTCAAGCC CGAGACCTTC
GATGTCGGCG AGCGGCTGCG CAGCATCTCG GAGATGCTCG ATTCGGTGAC CGGCGCGCGC
ATCCGCGTGG TGACCGACCT GCCCGGCGCC CCCTGCTTCG TGCGCGCCGA TGCGAGCCAG
TTCGAGACGG CCCTGGTCAA CATGGCAGTC AACGCCCGCG ATGCCATGGA CGGCGAGGGC
CGCCTGACCC TGCGCCTCGA CGGCGCCGTC CCGATGCCGC CGATCCGCGG CCATGCCGGC
GCGGCCGGGC CCTTCGTCGC GGTCTCGGTC GTCGATACCG GCACCGGAAT CGCCAGCGCC
GATTTGGGCC GCATCTTCGA GCCGTTCTTC ACCACCAAGG AGGTCGGAAG GGGCACGGGG
CTCGGCCTCT CGCAGGTGAT CGGCTTCGCC AAGCAATCCG GCGGAGACGT GGACGTGTGG
AGCCGCGCGG GCGAGGGCAC CACCTTCACC CTCTACCTGC CCGAGGTCGC CGCCCCCCTC
GAAGCCCCCG CCCCCGCCCG GCCGAGGCCG GATGCGGATG CCGAGGCGCA TCTGCGGATC
CTCGTGGTCG AGGACAACCT CGAAGTCGGC CGCTTCTGCA CCCAGATCCT GGAGGAACTC
GGCCACCAGC CGGTCTGGGC CGAGAACGCC GAGGCGGCCC TGGTCGAATT GGAACGCACC
GAGACGCCGT TCGAGGCGGT GTTTTCCGAC GTCGTGATGC CCGGCATGGG CGGCATTGCC
CTCGCCCGCA TCCTGCGCGA GCGCTACCCC GATCTGCCGG TGGTCCTCAC CTCCGGCTAC
AGCCACGTCC TGGCGCAGGA CGACGCGCAC GGGTTCGAGC TGCTGAGGAA GCCGTATTCG
GCACAGGAGC TGGGGCGGGT GCTGCGGGAG ATGGCGGGGC GGCGGGGGAG GCGGGAGACG
GCCTCGCGCT GA
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| Protein sequence | MPESLPSPVP SDAESARFRI LEPLRAAQEQ LARVQDAAGI GVFTLDLREG VLHPSPAFCR
LHGLEVRERY ALAALAERFP AEDTAIPSGT SSEEAVYRVR DSRTGASRWI ARTLEIERDA
DGAALRLAGV VRDVTEQRAQ GTALAESEQH YRTLFEQMDE GYSVIEFIDG PHGPLSDYVH
VTANRAYAQH AGIENVAGKR LREIVGEEAE GWLALYGDVL RTGRPIRFQR ELVATGRYLE
LAAFRIEPPS RRQVAVLFQD ITARRRVEHL LHSKAADLEA EVVAQRRDRD RVWTLSPVLK
VVATPDGRIE AVNPSWGRTL GWSPAETVGR YVPDFFAPEE RATAEAALER LAAGASTDLE
LTCLTKDGGT CRVLWTIVPA DGLLYGFGRD ITEQRHAEEA LRQSQKLEAV GQLTGGVAHD
FNNLLTIIRS SVEFLRRPDL APERKRRYLD AVSDTVDRAA KLTGQLLAFA RRQALKPETF
DVGERLRSIS EMLDSVTGAR IRVVTDLPGA PCFVRADASQ FETALVNMAV NARDAMDGEG
RLTLRLDGAV PMPPIRGHAG AAGPFVAVSV VDTGTGIASA DLGRIFEPFF TTKEVGRGTG
LGLSQVIGFA KQSGGDVDVW SRAGEGTTFT LYLPEVAAPL EAPAPARPRP DADAEAHLRI
LVVEDNLEVG RFCTQILEEL GHQPVWAENA EAALVELERT ETPFEAVFSD VVMPGMGGIA
LARILRERYP DLPVVLTSGY SHVLAQDDAH GFELLRKPYS AQELGRVLRE MAGRRGRRET
ASR
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