| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4011 |
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| Symbol | |
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| ID | 5831492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4452025 |
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| End bp | 4454478 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641369803 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001641453 |
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| Protein GI | 163853410 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.237804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAA TCGTCGCCTG TGTCGCGAGC CAGCACGATT TCGGCCTTGT TGCCGTTTCG
GCCGGGATCT GTCTGCTCGG CTGCTTCTCC ACCGTCACCC TGATGGCCGA GGCCGCCAGG
GCCGAGCGTC GGTCCGTTTC CCGCTGGTTG ATCGCGGCGG CGTTCGTGTT CGGCTGCAGC
GTCTGGTCGC TGCACTTCGT GGCGATGCTG GCGTTTCAGC CGGGTGCGCA GGCGGCCTAC
GGCCTTCTTC CCACCGCAGC CTCGATCGGG ATTGCAGTCG CCGGGGCGCT GATCGCTTTC
CTGATCTGGT GCCGGGCGGA CCACGACCCG CTCAAGGTGG CGGCGGCCGG CTTGGTGCTG
GCAACGGCGA TTTCGGGCAT GCACTACGCG GGTGTGGGCG CGATGGCGGC CAACAGCCTG
CTCGCCTTCG AGGAGGCGCT TGTCCACGCT TCGCTCGGGC TCTGCGCGAC CCTTGCGGTG
ATCGCCCTCG CCCGGGCCGG CGATCTCGCC GGGCTCGGCC GCCGCATCGA GGTCAGCCTG
TGGCTGGCGC TCGCGATCTG CGGCCTGCAC TTCACCGGCA TGACGGCGCT CACTGTCGCG
CCCGCCGCCC CGGTGGCGGG GGGCGGGGCC GTCCTCGGTT CGACGCAGCT CGGCCTCGCG
GTGGGGCTCG TCAGCCTCGC CGTCCTCGCT GCCGGGCTCA CGGCGCTGCT GATGCAGCAG
CATCTCATGC GCCGCCGCAT GGACGAGCTG AGCCGCATGC GCCTGCTCGG CAACCTCGCC
CACGAGGTGC TGTTCATCCA CCGCGAGGGC CGGGTGGTCG AGATCAATCA GGCGGGCCTG
CGCCTGTTCG GCGCCCCGGC CTCCGAGATC ATCGGCCGGC CGCTGCTCGA CCTGTTCGCG
GAGGCCGACG CTCCGGTTCT GCTGCGGCGC AGCCGGTGCC ATCCGGAGGA TCTGTTCCCG
GAGGAGTTCG AGGTCCGCAC CGCCGCCGGC ATCGCCGTGC CGGTGGAACT CACCTGCCGC
GCCATCGACT ATCTCGGCCG GCCCGCCACG GCGGTGGCCC TGCGCGACCT CAGCCGGCGC
CGCCGCGACG AGGCGCGCAT CCGCCACCTC GCCCTGCACG ACGCCCTGAC CGACCTGCCC
AACCGCACCC TGCTGGAGGA GCGCCTGGGG CTCGCCCTGG AGAATGCGGC CGAGAACGGG
ACGAGCGTGG CCCTGGCCTA TCTCGACCTC GACCGGTTCA AGCCCGTCAA CGACTTTCAC
GGCCACGCCG CCGGCGACGC CCTGCTGGTC CAGGCGGCCA AGCGCATGCT GGCCGAGCTG
CGCCCGACCG ACACCCTCGC CCGGATCGGC GGCGACGAGT TCGTCATCGT GCTGGCCCAT
ACCCGCACCC TCGCGCAGGT CGCCGAGACC GCCGAGCGTC TGGTCGCGGC GCTCGGCCGC
CCGTTCCAGA TCGAGGGCCA GATCGGGGGC TCGGTCGAGG GCTTGCGCGT CGAGATCGGC
GCCTCGGTCG GCATTGCTCT CTATCCCAGC GACGGCAGCA CCGCCGAGAG CTTGAAGCGC
GCCGCCGACA CCGCCCTGTA CCGGGTCAAG GATGAGGGCC GCGGCGCGGT GCGCTTCTTC
GAGGCCGCGA TGGACGAGCA GCTCCAAGCG CGCCGCCGGG TCGAGCACGA GCTGAGCGGG
GCGATCGCGC GGGGCGAATT GGCCCTCGAC TACCAGCCGA TCGTCAACGG ACGCACCGGC
GAGATCGAGA TCTTCGAGGC GCTGATCCGC TGGCACCACC CGGAGCGCGG CTGCGTGTTC
CCGGCGGACT TCATCCCGCT CGCCGAACAG ACGGACCAGA TCGGGCGGAT CGGCGCCTGG
GTGCTCGACA CCGCCTGCGC CGCCGCCGCA GCCTGGCCGC ATCCCTGGCG GGTCTCGGTC
AACGTTTCGC CGAAGCAGTT CCGCCAGCCG GGCTTCGCCG CCGGCGTGGC GGCGGTCCTC
GGCCGCCACG GGCTCTCACC GGGGCGGCTG GTTCTGGAGA TCACCGAGAG CGTGTTCATC
CACGACGCAG CGACGGCGCT GACGGTGCTC ACGGCGCTCC GCACCCTCGG CGTGCGCCTC
GCGCTGGACG ATTTCGGCAC GGGTTATTCG AGCCTGAGCT ACCTGCAGCG GTTCCAGTTC
GACAAGATCA AGGTCGATCG GTCCTTCGTG CGCGGCCTCG GGCAGCACGC GGACGCCCTG
ACGATCGTGC GCGCGATCAC CCATCTCGGG CACAATCTCG GCCTCACGGT CACGGTCGAG
GGGGTGGAGA CGCAAGAGCA GCTCACGGTT CTGCGTGAAC TCGGCTGCGA CCAGATGCAG
GGCTACCTGT TCGCCCGGCC CGCTCCGATG ACCAACCTGT CGGAGACTGG CCCTTCGGAT
CGGGCGCGGC TGCGGGCCTT GTTCTCGAAC GAGGCCGCCC GGGCCTACGC GTGA
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| Protein sequence | MLKIVACVAS QHDFGLVAVS AGICLLGCFS TVTLMAEAAR AERRSVSRWL IAAAFVFGCS
VWSLHFVAML AFQPGAQAAY GLLPTAASIG IAVAGALIAF LIWCRADHDP LKVAAAGLVL
ATAISGMHYA GVGAMAANSL LAFEEALVHA SLGLCATLAV IALARAGDLA GLGRRIEVSL
WLALAICGLH FTGMTALTVA PAAPVAGGGA VLGSTQLGLA VGLVSLAVLA AGLTALLMQQ
HLMRRRMDEL SRMRLLGNLA HEVLFIHREG RVVEINQAGL RLFGAPASEI IGRPLLDLFA
EADAPVLLRR SRCHPEDLFP EEFEVRTAAG IAVPVELTCR AIDYLGRPAT AVALRDLSRR
RRDEARIRHL ALHDALTDLP NRTLLEERLG LALENAAENG TSVALAYLDL DRFKPVNDFH
GHAAGDALLV QAAKRMLAEL RPTDTLARIG GDEFVIVLAH TRTLAQVAET AERLVAALGR
PFQIEGQIGG SVEGLRVEIG ASVGIALYPS DGSTAESLKR AADTALYRVK DEGRGAVRFF
EAAMDEQLQA RRRVEHELSG AIARGELALD YQPIVNGRTG EIEIFEALIR WHHPERGCVF
PADFIPLAEQ TDQIGRIGAW VLDTACAAAA AWPHPWRVSV NVSPKQFRQP GFAAGVAAVL
GRHGLSPGRL VLEITESVFI HDAATALTVL TALRTLGVRL ALDDFGTGYS SLSYLQRFQF
DKIKVDRSFV RGLGQHADAL TIVRAITHLG HNLGLTVTVE GVETQEQLTV LRELGCDQMQ
GYLFARPAPM TNLSETGPSD RARLRALFSN EAARAYA
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