Gene Mext_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4001 
Symbol 
ID5832785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4440702 
End bp4441964 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content73% 
IMG OID641369793 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001641443 
Protein GI163853400 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.511389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACAC CCCTTGAACG CATCGTCGTC GTCGGCGCCT CGCTGGCGGG TCTTGCCGCC 
GCCCATGCCC TGCGCGAGCG GGGCTATGCC GGCCGCCTGA CCCTGGTCGG CGCCGAGCCT
CACCGACCCT ACGACCGGCC GCCGCTCTCC AAGCAGGTGC TGCGCGGGCT CTACTCGGCT
GACACCACCC TGCCCTGCCA TCCCGATCTG CGCGCGGAGT TCCGCCTCGG GCAGCCGGCG
ACCCGGCTCG ACCTGACCGG GCGCGTGGTC GAATGCGAAG ACGGCAGCCG CCTGCCCTAC
GACCGCCTGC TGATCGCCAC CGGCACCCGG GCGCGGCCCT GGCCCAACCC GGAGGAAGCC
GCCCTCGCCG GTGTCTTCAC CCTGCGCGAC CGCGACGACG CCGAGCGGCT CGGCGCGCAT
CTGCGGACCA AGCCGCAACG CGTCGTCCTC GTCGGCGGCG GCTTCATCGG CTTCGAGGTC
GCCTCGACCT GCCGCGATCT CGACATCCCC GTCACCCTGC TGGTGCGCGA TGCCGTGCCG
CTGGCTGCGG CGCTCGGCCC CCGCCTCGGC GGCCTGATCG GCGAGGTCGC CCGCGAGAAG
GGCGTCGATC TGCGCCTCGA ATCCGAGATC GAGCGGATGG AGGGGGAAGC GGGCCGCCTC
GCGGCCGTGA TCCTGAAGGA CGGCACGCGG ATCGAGACCG ACTGCCTCGT CGCGGCGATC
GGCACTTTGC GCAATGTCGA GTGGCTCGAC GGCTCGGGAC TGGAAGCCGA CGCAGGGGGC
CTGCGCTGCG ACGCCTTCTG CCGCGCCCTG CTCCAAGACG GCCGCGTCGC CGAGGGCGTT
TTTTGCGCCG GCGACGTGGC GCGCTGGCCG AACCCGCACG ACGACGACGC CCTCGTGGCG
GTCGAGCACT GGGGCAACGC CCGGGCGCAA GCCGAGACCG CCGCCGCCAA CATGCTGGCG
GGCGACGCCT CGGCGATGCG CCGCCACGAC CACCTGCCCG ACTTCTGGTC GCAGCAATTC
GGCCTGACGA TCAAGCTCGT CGGCCTAACC GAGGGCGCCG ATGCCCTCGC GGTGGTGCAC
GGCTCGTTCG AGGAGCGCCG CCTCGTGGCC GCCTTCGGCA AGGCGGGCCG CACCGTCGCC
GCCGCCGCCA TCGACAGCGC CCGCTGGCTG CCCGCCTACA AGGCCGCGAT CCGCGAGCGC
GCCCCATTCC CGCCGATCGA GGACGCCGTC GATCAGCCCC GCATCCGTGT GCAGGAGCCC
TAA
 
Protein sequence
MTTPLERIVV VGASLAGLAA AHALRERGYA GRLTLVGAEP HRPYDRPPLS KQVLRGLYSA 
DTTLPCHPDL RAEFRLGQPA TRLDLTGRVV ECEDGSRLPY DRLLIATGTR ARPWPNPEEA
ALAGVFTLRD RDDAERLGAH LRTKPQRVVL VGGGFIGFEV ASTCRDLDIP VTLLVRDAVP
LAAALGPRLG GLIGEVAREK GVDLRLESEI ERMEGEAGRL AAVILKDGTR IETDCLVAAI
GTLRNVEWLD GSGLEADAGG LRCDAFCRAL LQDGRVAEGV FCAGDVARWP NPHDDDALVA
VEHWGNARAQ AETAAANMLA GDASAMRRHD HLPDFWSQQF GLTIKLVGLT EGADALAVVH
GSFEERRLVA AFGKAGRTVA AAAIDSARWL PAYKAAIRER APFPPIEDAV DQPRIRVQEP