| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3910 |
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| Symbol | rimO |
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| ID | 5835134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4345061 |
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| End bp | 4346407 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641369701 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001641352 |
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| Protein GI | 163853309 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0803729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAA CCGCCTCTCC CTCGGACACC AAGGGCGCCG CCGCGCCGCG GATCTCCTTC
GTGTCGCTGG GCTGCCCCAA GGCGCTCGTC GATTCCGAGC GCATCCTCAC CCATCTGCGC
GCCGAGGGCT ACGAGCTGTC GCGCCGCCAT GATGGGGCGG ATGTCGTCAT CGTCAACACC
TGCGGCTTCC TCGATTCGGC CAAGGCCGAG TCGCTCGCTG CGATCGGCGA GGCCATGGCC
GAGAACGGCC GGGTGATCGT CACCGGCTGC ATGGGCGCGC AGCCGGAAGA GATCCGCGAG
AAGTATCCGA ACCTGCTCGC CGTCACCGGC CCCCAGGCCT ACGAGTCGGT GGTCGCCGCG
GTGCATGAGG CGGTGCCGCC CGCCCACGAT CCGTTCCTCG ACCTGATCCC GCCGCAAGGG
GTCAAGCTCA CCCCGCGCCA CTACGCCTAT CTGAAGATTT CCGAGGGCTG CAACAACCGC
TGCACCTTCT GCATCATCCC GAGCTTGCGC GGCGATCTCG TCAGCCGCCC GGCGGGCGAC
GTGCTGCGCG AGGCCGAAAA GCTCGTCAAA GCCGGCGTGA AGGAGTTGCT CGTCGTCTCG
CAGGACACCT CCGCCTACGG CATCGACACC CGCTACGCGT CGAGCCCGTG GCAGGACCGG
GAGGTGCGCG CCCGGTTCTA CGATCTGGCC AAGGAACTCG GCGAGCTCGG GGCGTGGGTG
CGGCTGCACT ACGTCTACCC CTACCCGCAT GTCGACGAGG TCATCCCGCT GATGGCCGAG
GGCAAGATCC TTCCCTATCT CGACATGCCG CTCCAGCACG CCAGCCCCTC GGTGCTCAAG
CGCATGCGCC GGCCGGGCAA CCAGGAGAAG CAGCTGGACC GCATCCGGCG CTGGCGCGAG
ATCTGCCCGG ATCTCGCCAT CCGCTCGACC TTCATCGTCG GCTTCCCCGG TGAGACCGAT
GCCGAATTCG AGGAACTGCT CGACTGGATT CGCGAGGCAC GGCTCGAGCG CGTCGGCTGC
TTCGAATACG AGCCGGTCCG CGGCGCCACC GCCAACGATC TCGGGCTGCT GGTGCCGCCG
GAGGTGAAGG CCGAGCGCAA GCGCCGCTTC ATGGAGGCGC AGAGCCACGT CTCGCTGCGC
TTGCAGCGGG CGAAGGTGGG CAAGCGCCTG TCGGTCATCA TCGACGAGGC GGGCCCGACC
GGCGCGCGAG GCCGCTCCAA GGCCGACGCG CCGGAGATCG ACGGCAGCGT CCACGTCACG
TCGCGCCGTC CCGTGCGGCC CGGCGACATC GTCACCGTGA AGATCGAGCG GGCCGACGCC
TACGACCTGC ACGGCATCGC GGTGTAG
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| Protein sequence | MTATASPSDT KGAAAPRISF VSLGCPKALV DSERILTHLR AEGYELSRRH DGADVVIVNT
CGFLDSAKAE SLAAIGEAMA ENGRVIVTGC MGAQPEEIRE KYPNLLAVTG PQAYESVVAA
VHEAVPPAHD PFLDLIPPQG VKLTPRHYAY LKISEGCNNR CTFCIIPSLR GDLVSRPAGD
VLREAEKLVK AGVKELLVVS QDTSAYGIDT RYASSPWQDR EVRARFYDLA KELGELGAWV
RLHYVYPYPH VDEVIPLMAE GKILPYLDMP LQHASPSVLK RMRRPGNQEK QLDRIRRWRE
ICPDLAIRST FIVGFPGETD AEFEELLDWI REARLERVGC FEYEPVRGAT ANDLGLLVPP
EVKAERKRRF MEAQSHVSLR LQRAKVGKRL SVIIDEAGPT GARGRSKADA PEIDGSVHVT
SRRPVRPGDI VTVKIERADA YDLHGIAV
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