| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3892 |
|---|
| Symbol | |
|---|
| ID | 5834319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 4323038 |
|---|
| End bp | 4324096 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641369683 |
|---|
| Product | putative methyl-accepting chemotaxis protein |
|---|
| Protein accession | YP_001641334 |
|---|
| Protein GI | 163853291 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.344749 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACT TGTCCCTTGC CGACGTCGTC GGTGCGTCGG CGCAGGCCCT GAAGTCCAGG
GCCTCTTCCA ACCTCGGCGC CATCCAGTTG ATTGCCAACC GCATGAAGCT GCTGGCCCTG
AATGCGCTCA TCGAGGCGGC CCATGCCGGC GAGAAGGGCG CGGGATTCTC GGTCGTCGCG
CAGGAAGTCC GAACCGTTTC GACCGAAGTC GAGACGCTGG CCGCAGCCCT GGGGACGGGC
CTCAGCACCG GTGTGGACAA CCTCACCGAG GCCGTCGCAC GGCTCACGGG CGAGGCCCGC
GCGGCCCGTT GCGTGGACCT CGCCCTGAAC GCCGTCGAGC TGATCGACCG GAACCTCTAC
GAGCGCACCT GCGACGTGCG CTGGTGGGCG ACCGACGCCG CTTTGGTCGC CTGCGGCCGG
GATCCTTCGC CGGAGAATGC GGCTTATGCC GGCGAGCGGC TCGGGGTGAT CCTGTCGGCC
TACACGGTCT ATCTCGATCT CTGGCTGTGC GATCTTCAGG GCCGGGTGAT CGCCCATGGC
CGCCCCGATA CCTATCCGGA CATCCTCGGC GCGCAGGTCG CGGCCGAGAC CTGGTTCCGG
GACGCATGCG CCCTGCCGAG CGGCGACGAT TACACGGCGG TCGACGTCCG GACCGAGGCG
CGCCTGCGCG GCGCACAGGT CGCCACCTAC TGCGCGAGCG TGCGGGAGGG CGGTCGCCCG
GAGGGGGCGC CGCTGGGCAT CCTTGCCATC CATTTCGACT GGCAGCCGCA GGCCCGCGCC
ATCGTCCAGG GCGTCCGGCT GGGCGCGGGC GAGCGGGAGC GCATCCGCGT GATGCTGCTC
GATGCCCGCA ACCGCGTGAT CGCCTGCTCC CGAAACGAGG GGGTGCTGAG CGAGACCTAC
CGGCTCCGCA CCGACGGCCG GTCCCAGGGT CACTACCGGG ATGGGGACCG CCTCGTGGCC
TTCCACGACA CCCCCGGCTA CGAAACCTAT GGGGGCCTGG GCTGGCGCGG CGTGATCGAG
CAGCGGAGCG TCGAAGGCGG CACGAATAGC CTTCCGTGA
|
|---|
| Protein sequence | MNDLSLADVV GASAQALKSR ASSNLGAIQL IANRMKLLAL NALIEAAHAG EKGAGFSVVA
QEVRTVSTEV ETLAAALGTG LSTGVDNLTE AVARLTGEAR AARCVDLALN AVELIDRNLY
ERTCDVRWWA TDAALVACGR DPSPENAAYA GERLGVILSA YTVYLDLWLC DLQGRVIAHG
RPDTYPDILG AQVAAETWFR DACALPSGDD YTAVDVRTEA RLRGAQVATY CASVREGGRP
EGAPLGILAI HFDWQPQARA IVQGVRLGAG ERERIRVMLL DARNRVIACS RNEGVLSETY
RLRTDGRSQG HYRDGDRLVA FHDTPGYETY GGLGWRGVIE QRSVEGGTNS LP
|
|---|
| |