Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3791 |
Symbol | |
ID | 5835267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4209397 |
End bp | 4210218 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641369583 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001641236 |
Protein GI | 163853193 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0700292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCAGG GCAGCACCAA GACCGCAATC GTCACCGGGG CCGCCTCCGG CATCGGGTTA TCGACCGCCA AAGCCTTGCG GGCTGCGGGC TACCGCGTGT TCGGGACAAG CCGGAAATCG GTGCCTGCCG CGGGGGGCGG GATAAGCATG CTGGTCTGCG ACGTCACCAA GGACGCGTCC GTCACCGAGA TGATCGGGAC GGTCTTCGGC GAGACCGGCC GCATCGACCT GCTCGTGAAC AATGCCGGCT TCGGCATCAG CGGCCCTGCC GAGGAAACCT CGATTGCGCA GGCGCAGGCC ATGTTCGACG TAAACCTGTT CGGCGTCATC CGCACGACCC GTGCGGTCTT TCCCCTGATG CGTGCCCAGA AGGGTGGCCG CATCATCAAC GTGAGCTCGG TGCAGGGCTT TATTCCCGCG CCTTACATGG CCCTGTATGG CGCCAGCAAG CACGCGGTCG AGGGCTACTC GGAGTCGCTC GACCACGAGG TCCGTAGCCA GGGCATCCGG ATCGTGCTCG TGGAGCCCGC CTTCACGCGG ACCGCGTTCG ACCGGAACCT CGTTCGATCC GATACGCCCC TCGACGTTTA CGAGGCGGAG CGCGCCGGGC GTAACCGCTT CCTGACCGAC GTCATGGTGA CCGCCGATGC GCCCGAGGTC GTGGCAAAGG TCATCGTGAG CGCCGCCACG ACCGCGACGC CCAAGCGGCG GTACACCGCG GGATCCAAGG CACGGCAGAT TAGTCTGCTG CGACGCTTCG TACCGGCAAG CGCCTTTGAC AAGGCCTTTC GCAAGGAGAT GCGCCTTCCG CCGATCGCAT GA
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Protein sequence | MTQGSTKTAI VTGAASGIGL STAKALRAAG YRVFGTSRKS VPAAGGGISM LVCDVTKDAS VTEMIGTVFG ETGRIDLLVN NAGFGISGPA EETSIAQAQA MFDVNLFGVI RTTRAVFPLM RAQKGGRIIN VSSVQGFIPA PYMALYGASK HAVEGYSESL DHEVRSQGIR IVLVEPAFTR TAFDRNLVRS DTPLDVYEAE RAGRNRFLTD VMVTADAPEV VAKVIVSAAT TATPKRRYTA GSKARQISLL RRFVPASAFD KAFRKEMRLP PIA
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