Gene Mext_3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3576 
Symbol 
ID5833008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3957548 
End bp3959191 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content68% 
IMG OID641369369 
Producthemolysin-type calcium-binding region 
Protein accessionYP_001641026 
Protein GI163852983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.996068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGCAAG CCTCCGCACG AAGAAAGTCA TTCATGGCCA ACACCTTCTA CGTTTCTCCG 
ATAGGCTCAG ACTCTCAGTC CGGCACGTTG GAAAGCCCAT TCGCCTCCCT AGAATACGCT
CACGCCAAGG CTCAGCCTGG CGACACCATT CTGCTACGCG GCGGCGTCTA CAATCCGCTT
TCAGGCATTG ATCTCAAGAG CGACGGCGCC AGCGGCAAGC CGATCACGAT CGCAAGCTTT
CCCGGCGAGC ACGCCGTCTT GGATGGCTCC CGCCTGCCTC AAGGCGACTA CGTCATCAAC
ATGCAGGATG CGTCCTGGAA CCGTCTGGTC GACATCGAGG TCCGCGACGG CCCCGAAGGG
GGCATCATCA TCCGGGGGAA CTCGCACGAC AACGTCATCG AGCAGCTCGA CGTGCATCAC
AACGGCGGCC AGTCGGAGTG GGACGGCAAG GGCATCTCGC TCTACGGGAC GGGCGGGAAC
AACCTGTTCC TGAACAACGA CTCGCACGAC AACCGCGACC TGCGCGGCGA CAACGCCGAC
GGGTTCCAGA TCAGCAGTTC GGGCGGGGGC AACGTGCTCC GGGGCAACCG CGCCTGGGGC
AACTCGGACG ACGGGTTCGA CCTGTTCAAC GTGCAGAACG GAACCGACGC CGGCGCGGTG
CTGCTGGACG GGAACTGGGC CTACGGCAAC GGCTACGACG CGTCGGGCAA TCCCATCGGG
GACGGCAACG GCTTCAAGCT CGGCGGCCAG CGAGCCGACA GCGGCAGCAC CTCGGGAGGA
CACCTCCTCG TAAACAACGT CGCGTGGGAC AATGCGGTCG GCGGCTACGC CGGGAACAAC
TCCACCGAGG CCTCGACGCT CACCAACAAC ACCGCCTATG ACAACGGCGA CTACAACTTC
GCCCTCCGAG AGCAGAGCAA CGTTCTGAGC GGCAACCTGT CCTTCGGGAC GGGCCGGAAC
CTGATCTCGG GGACAACCTC CGGCGATAGC TGGACGCTGT CCACGCCCCC GGACGCGGGC
GACTTCCAAT CGCTCGATGA TAGCGCAGCA CGCAGCACGC GGGCCGCGGA TGGCTCGCTC
CAGAGCGCGG GCTTCCTCCA GCCCATTTCG GGCGGGCGGA TGGACGACAT CGGGGCCGAC
ACCGTCGCGA CCGCGCCAGA GACCACTGGC TCCGCGACGC CGGACCCGCT CCCGCCCACC
ACGACCGGCG GGACGGGCTC CGTGGGCGGC ACCGTCAAGG GCACCTGCGG GGCCGACGTG
CTGTTCGGCT CCACCGGCGA CGACCTGATC CGCGGCGGTC GGGGCGACGA CGAGCTCCAC
GGGGGCGCGG GCGACGACCA GCTCCGGGGT GGGGCCGGCG ACGACGTGCT GTTCGGCGAG
GGGGGCAACG ACTTCCTCCT AGGCGGCTGC GGCGCCGACA CGTTCGTGTT CGGGGCTGGA
AAGGGTGGGG CGACGACGAC CGTGGGCGAC TTCGTGCCCG GCACCGACCA CCTCCAGCTC
GCGGATGGGC TCGCGCTCGC ATCGTTCGAC ACCCTCGACG TCAACGACGA CGGCCGGAGC
GACACCGCGC TCACCTTGAG CGACGGCAGC GACGTCCACG TCCTGGGCGT GAGCGGGGCC
AACCCGTGGG ATTGGCTCGC CTGA
 
Protein sequence
MQQASARRKS FMANTFYVSP IGSDSQSGTL ESPFASLEYA HAKAQPGDTI LLRGGVYNPL 
SGIDLKSDGA SGKPITIASF PGEHAVLDGS RLPQGDYVIN MQDASWNRLV DIEVRDGPEG
GIIIRGNSHD NVIEQLDVHH NGGQSEWDGK GISLYGTGGN NLFLNNDSHD NRDLRGDNAD
GFQISSSGGG NVLRGNRAWG NSDDGFDLFN VQNGTDAGAV LLDGNWAYGN GYDASGNPIG
DGNGFKLGGQ RADSGSTSGG HLLVNNVAWD NAVGGYAGNN STEASTLTNN TAYDNGDYNF
ALREQSNVLS GNLSFGTGRN LISGTTSGDS WTLSTPPDAG DFQSLDDSAA RSTRAADGSL
QSAGFLQPIS GGRMDDIGAD TVATAPETTG SATPDPLPPT TTGGTGSVGG TVKGTCGADV
LFGSTGDDLI RGGRGDDELH GGAGDDQLRG GAGDDVLFGE GGNDFLLGGC GADTFVFGAG
KGGATTTVGD FVPGTDHLQL ADGLALASFD TLDVNDDGRS DTALTLSDGS DVHVLGVSGA
NPWDWLA