Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3441 |
Symbol | |
ID | 5833298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3819865 |
End bp | 3821457 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641369240 |
Product | phytoene desaturase |
Protein accession | YP_001640898 |
Protein GI | 163852855 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.826621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0554878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGCAGT CGCGGGAAGG TTTGCGTACC CTGTTGGGCC GCCGCACGAT CGTCGTCGGG GCCGGCCCCG GCGGGCTTGC CACGGCGCTG CTCCTGGCCA AGGCCGGACT GCACGTCACG CTGATCGAAA AGGACGCCCA AGTCGGCGGG CGCACCAAGA CCGTGGAGGC GCCGGGCGGC TACCGCTTCG ACATCGGCCC GACCTTCTTC CTCTATCCGC AGATCCTCGC CGACATCTTC GAATCCTGCG GCGAGCGCCT GGAAGACCAT GTCCGGCTGG AGCGGCTCGA TCCGCAATAC AACCTCGTCT TCGGGGGTGA GGGCGGCATT TCGGGGCAGA TCCGCGCCAC CGGCGATGTG CCGCGGCTGA AGGCCGAGAT CGCCCGCCTC GCCCCCGCCG ATGCCGAGAA CGTCGAGAAG TTCTTCGAAG AGAACCGGAC CAAGCTGAAC TACTTCAAGC CGGTGCTGGA GCAGCCCTTC GACAACATCC TGTCGATGGC GAGCCCGGCG ATGCTGGCCG CCCTGCCCCA TCTCCATCCC GGCCGCAGCG TGGACCGGGA TCTCAAGCGC TACTTCGCCG ACCCGCGGGT GCGCCTCGCC TTCTCGTTCC AGACCAAATA TCTCGGGATG AGCCCCTTCC GCTGCCCGAG CCTGTTCACG ATCCTCTCGT TTCTTGAATA CGAGCACGGG GTCTACCACC CGGTCGGCGG CTGCGGCGCG GTCTCGGAGG CGATGGCGGG GCTGGCCCGC CGCATGGGCG TCGACATCCG CCTCGGGCAA TCGGTCGAGC GGATCCTGTT CGAGGGCAAG CGCGCCACCG GCGTGGTCGT CGGCGGCGAG ACTCTGAAGG CCGATGCGGT GGTCGTGAAC GGCGACTTCG CCAAGGTGAT CCGCGATCTC GTGCCGGAGG AGCGGCGCCC GCGCTGGCGC GACGCCAAGA TCGGCAAGGC GCGCCTCTCC TGCTCGACCT ACATGCTCTA CCTCGGCATC GAGGGCAAAA TGCCCGAGAG CCTGGGCCAC CACACCATCC TGCTGGCCAA GGAATACGAG CGCAACATCA AGGAGATCAC CGGCGGCACG CTGCCGATGG AGCCTTCGAT CTACGTGCAG CATGCCGGCT TCACCGATGG CGGCATGGCG CCGCCCGGCC ACACCGCCCT CTACGTGCTG GTGCCGGTGC CGAACCTGAA GGCGGGCATC GATTGGGAGA CGGTCGGCCC GACCTACCGC AAGCTGATTC TGGAGCGCTT GAAGCTCCTC GGCCTTCCCG ACATCGAGAG CCGCATCCGC TACGAGCGCG TGGTCGATCC CCGCGACTGG CGCGACGAAT TCGCGGTGCA CGAGGGCGCG ACCTTCAACC TCGCCCACGA TCTCATGCAG ATGCTGTGGT TCCGGCCGCA TAACCGCTTC GGGCCGGGGC TCTACCTCGT CGGCGGCGGC ACCCATCCGG GCTCCGGTCT TCCGGTGATC TACGAGGGCG CGCGCATCTC GGCCCGGCTC CTGATCGAGG ATCTCGCCAA GGAGAAGGCG CCCGCGATCC TGGCGGACCT GCCGACGACC TCGCCGCTCG CCACGCAGGG CGATCCGAGC TGA
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Protein sequence | MLQSREGLRT LLGRRTIVVG AGPGGLATAL LLAKAGLHVT LIEKDAQVGG RTKTVEAPGG YRFDIGPTFF LYPQILADIF ESCGERLEDH VRLERLDPQY NLVFGGEGGI SGQIRATGDV PRLKAEIARL APADAENVEK FFEENRTKLN YFKPVLEQPF DNILSMASPA MLAALPHLHP GRSVDRDLKR YFADPRVRLA FSFQTKYLGM SPFRCPSLFT ILSFLEYEHG VYHPVGGCGA VSEAMAGLAR RMGVDIRLGQ SVERILFEGK RATGVVVGGE TLKADAVVVN GDFAKVIRDL VPEERRPRWR DAKIGKARLS CSTYMLYLGI EGKMPESLGH HTILLAKEYE RNIKEITGGT LPMEPSIYVQ HAGFTDGGMA PPGHTALYVL VPVPNLKAGI DWETVGPTYR KLILERLKLL GLPDIESRIR YERVVDPRDW RDEFAVHEGA TFNLAHDLMQ MLWFRPHNRF GPGLYLVGGG THPGSGLPVI YEGARISARL LIEDLAKEKA PAILADLPTT SPLATQGDPS
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