Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3410 |
Symbol | |
ID | 5831362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3779924 |
End bp | 3780886 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641369209 |
Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_001640867 |
Protein GI | 163852824 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.589969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.519615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCC GGTCCGCCGC CCGCCTCGTC CTCGCCGGCT TGACGCTGAG TCTCGCCCTC GGTTGCAACC CGGCCGCGGC GGAGGAATCC ACCCTGCGCA TCGGCTACCA GCGCTCCTCG GCGCTGATCT CGCTGCTGCG CGAGGACGCG ACCCTGGAAA CGGCCCTGAA GCCGCTCGGC GTCACCGTGT CCTGGCACGA ATTCACCAGC GGCCTGCCGA TCATGGAGGC GCTGAATGTC GGCCGCATCG ACGTCTCGGC GGACGTCGCC GACACGGTGC CGGTCTTCGC GCAGGCGGCG AATGCCAAGA TCACCTACAT CGCGCAGGAG GCGGCCTCGC CGGAGGCGCA GGCGATCCTG GTGCCGGGCG ATTCCCCGCT GAAGACGGTG GCCGACCTCA AGGGCCGCAA GGTCGCGGTC ACCAAGGGCG CCGGCAGCCA CTACCTGCTG CTCGCCGCGC TCAAGGCGGA GGGGCTGCCC TTCAAGAGCA TCAATCCGGC CTACCTCACC CCGGCCGACG GGCGCAGCGC GCTTTCCGGC GGCAGCGTCG ATGCCTGGGT GGCCTGGGAC CCGTTCCTCT CCGCCGCGCA GATCCAGGCC GGCGCGCGCA TCCTACGGGA CGGCACCGGG CTGTCGGCCT ACAAGCGCTA CTATCTCGCC TCCGACGCCT ATGCCGAAAA GCGCGCCGAC GTGCTGACCC TGCTCGTCAC CAAGCTGCGC GAGGCCGGGA CTTGGGTGAA AGCCAACCCG GACGCCGCCG CCGCGCGGCT GGGCGCCCTG TGGAAGATCG AGCCCGAGAT CGTCAAACAG GCCAATGCCC GCCGCTCCTA CCGGGTCGAA CCGGTGAACC GCGCGGGATT GGCGGAGCAG CAGACCATCG CCGATGCCTT CCGCGCCGAG GGCCTGTTGC CGCGGGCCGT GGATGCGTCG GCGCTGCCCG TCTGGGAATT GCCGTCACGC TGA
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Protein sequence | MNRRSAARLV LAGLTLSLAL GCNPAAAEES TLRIGYQRSS ALISLLREDA TLETALKPLG VTVSWHEFTS GLPIMEALNV GRIDVSADVA DTVPVFAQAA NAKITYIAQE AASPEAQAIL VPGDSPLKTV ADLKGRKVAV TKGAGSHYLL LAALKAEGLP FKSINPAYLT PADGRSALSG GSVDAWVAWD PFLSAAQIQA GARILRDGTG LSAYKRYYLA SDAYAEKRAD VLTLLVTKLR EAGTWVKANP DAAAARLGAL WKIEPEIVKQ ANARRSYRVE PVNRAGLAEQ QTIADAFRAE GLLPRAVDAS ALPVWELPSR
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