| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3395 |
|---|
| Symbol | |
|---|
| ID | 5835368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3764964 |
|---|
| End bp | 3765425 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641369194 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001640852 |
|---|
| Protein GI | 163852809 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.435542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGCCG ACCGCACCAC CCCGCGCGAC ACTCGCGCCG CCTATCCCCG GCTCGTGCCG
CTGACGACGC GCTGGGGCGA CAACGACGTC TACGGACACG TCAACAACGT CGTCTACTAC
GCCTTCTTCG ACACGGCGGT GAACGGGATC CTGGTGGAGG TGGGCGCCCT CGACATCGCC
CGCTCCCCCA TCATCGGCCT CGTGGTGGAG ACGGGCTGCC GCTACTTCGC CCCGATCGCC
TTCCCCGATC GGATCACCGC CGGCGTGCGG GTGGCCCATC TCGGCCGCAC CAGCGTGCGC
TACGAGATCG CAGTTTTTCG CGAGGACGAG GCGGAAGCCG CCGCGCAGGG GCACTTCGTC
CACGTCTATG TCGACCGGGA GACACGCCGG CCGGTGCCGC TGCCGGAGCG GCTGCGGGCC
GTGCTGGTGG AACTCGCGGC CGTCCGAGGG GAGGCGCCGT GA
|
|---|
| Protein sequence | MSADRTTPRD TRAAYPRLVP LTTRWGDNDV YGHVNNVVYY AFFDTAVNGI LVEVGALDIA
RSPIIGLVVE TGCRYFAPIA FPDRITAGVR VAHLGRTSVR YEIAVFREDE AEAAAQGHFV
HVYVDRETRR PVPLPERLRA VLVELAAVRG EAP
|
|---|
| |