Gene Mext_3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3280 
Symbol 
ID5835338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3640241 
End bp3641305 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content70% 
IMG OID641369080 
ProductPAS sensor protein 
Protein accessionYP_001640738 
Protein GI163852695 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCCG GCGACGACTG GCAGCTGACG GAGCGGGTTC GCGCCAGCGT CCGTTCCGGC 
AAGGGCGATC CCTTCGCGGC GGCCGTGCGG GCCACGCGCA TGGCGATGAT CATCACGGAC
CCGCGCCGGC TCGACAATCC GATCATCTAC GCCAACGACG CGTTCCTGCG GCTCACCGGG
TACACGCGGC TGGAGGTGAC GGGCCGCAAT TGCCGCTTCC TGCAGGGGCC CGGCACCGAT
TTCGACGCGG TGGCGCGGAT CCGTGCCGCG ATCGATGCCG AGCGGGACGT GCATGAAGAG
CTTCTGAACT ACCGCAAGGA CGGTTCGACC TTCCACAACG CGCTGTATAT CAGCCCCGTC
CACGACGAGG ACGGCACGCT GCTGTTCTAC TTCGCCTCGC AGTTCGACGT CAGCGACCGC
CACGCGCTCG CGGCCGAGCG CGACCGGACG CAGGCAGCCC TCGACGCGAA CGCCCTGCTG
CTGCGCGAGA TCGGACATCG CGCCCGCAAC GATCTCCAGA TGATCTCGGC CATGCTGACG
CTTCAGAGCG GCAACAGCGC CGATCCGGCG GTTCGCGCGG CGCTCGGCGA GGCGATCGGG
CGCATCGATG CGCTCAGCAC GCTCTACCGC CAGTCCGCCC CGCCGGAAGA GAGTGCGGGC
CACGATCTCG GCGATCTCGT CCGCGAGATC GCCGAAACCC TGGTCGAGGC CTCGGGCCGG
CGCGACATCG CGCTTGCGCT CGATCTCGTG CCGCTCCGCG TCCGGCCCGA GGCGGCGGGG
CCGCTCGCGC TCATCGTCAA CGAGGTCGTC TCCAACGCCG TCCGCCACGC CTTCCCGTCC
CGGGCCGGAC GGCTGACCGT TCGCATCGCC CGCGATGGGG CGGATGTCAC GGTGGTGGTG
GAGGATGACG GGATCGGTCC AAGCGCCACG GGCGACGGGA GCTTCGAGGC GACGCTGATC
GATGTTCTGA GCCGGCAGGT CGGCGGGACG ATCCGCGTCC GACCAAGCGA TCCGGCGGGC
ACCGCCGTCG AACTCCGCTT TCCGGCCGAG CGCATCGGGG TCTAA
 
Protein sequence
MEPGDDWQLT ERVRASVRSG KGDPFAAAVR ATRMAMIITD PRRLDNPIIY ANDAFLRLTG 
YTRLEVTGRN CRFLQGPGTD FDAVARIRAA IDAERDVHEE LLNYRKDGST FHNALYISPV
HDEDGTLLFY FASQFDVSDR HALAAERDRT QAALDANALL LREIGHRARN DLQMISAMLT
LQSGNSADPA VRAALGEAIG RIDALSTLYR QSAPPEESAG HDLGDLVREI AETLVEASGR
RDIALALDLV PLRVRPEAAG PLALIVNEVV SNAVRHAFPS RAGRLTVRIA RDGADVTVVV
EDDGIGPSAT GDGSFEATLI DVLSRQVGGT IRVRPSDPAG TAVELRFPAE RIGV