Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3280 |
Symbol | |
ID | 5835338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3640241 |
End bp | 3641305 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641369080 |
Product | PAS sensor protein |
Protein accession | YP_001640738 |
Protein GI | 163852695 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCCCG GCGACGACTG GCAGCTGACG GAGCGGGTTC GCGCCAGCGT CCGTTCCGGC AAGGGCGATC CCTTCGCGGC GGCCGTGCGG GCCACGCGCA TGGCGATGAT CATCACGGAC CCGCGCCGGC TCGACAATCC GATCATCTAC GCCAACGACG CGTTCCTGCG GCTCACCGGG TACACGCGGC TGGAGGTGAC GGGCCGCAAT TGCCGCTTCC TGCAGGGGCC CGGCACCGAT TTCGACGCGG TGGCGCGGAT CCGTGCCGCG ATCGATGCCG AGCGGGACGT GCATGAAGAG CTTCTGAACT ACCGCAAGGA CGGTTCGACC TTCCACAACG CGCTGTATAT CAGCCCCGTC CACGACGAGG ACGGCACGCT GCTGTTCTAC TTCGCCTCGC AGTTCGACGT CAGCGACCGC CACGCGCTCG CGGCCGAGCG CGACCGGACG CAGGCAGCCC TCGACGCGAA CGCCCTGCTG CTGCGCGAGA TCGGACATCG CGCCCGCAAC GATCTCCAGA TGATCTCGGC CATGCTGACG CTTCAGAGCG GCAACAGCGC CGATCCGGCG GTTCGCGCGG CGCTCGGCGA GGCGATCGGG CGCATCGATG CGCTCAGCAC GCTCTACCGC CAGTCCGCCC CGCCGGAAGA GAGTGCGGGC CACGATCTCG GCGATCTCGT CCGCGAGATC GCCGAAACCC TGGTCGAGGC CTCGGGCCGG CGCGACATCG CGCTTGCGCT CGATCTCGTG CCGCTCCGCG TCCGGCCCGA GGCGGCGGGG CCGCTCGCGC TCATCGTCAA CGAGGTCGTC TCCAACGCCG TCCGCCACGC CTTCCCGTCC CGGGCCGGAC GGCTGACCGT TCGCATCGCC CGCGATGGGG CGGATGTCAC GGTGGTGGTG GAGGATGACG GGATCGGTCC AAGCGCCACG GGCGACGGGA GCTTCGAGGC GACGCTGATC GATGTTCTGA GCCGGCAGGT CGGCGGGACG ATCCGCGTCC GACCAAGCGA TCCGGCGGGC ACCGCCGTCG AACTCCGCTT TCCGGCCGAG CGCATCGGGG TCTAA
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Protein sequence | MEPGDDWQLT ERVRASVRSG KGDPFAAAVR ATRMAMIITD PRRLDNPIIY ANDAFLRLTG YTRLEVTGRN CRFLQGPGTD FDAVARIRAA IDAERDVHEE LLNYRKDGST FHNALYISPV HDEDGTLLFY FASQFDVSDR HALAAERDRT QAALDANALL LREIGHRARN DLQMISAMLT LQSGNSADPA VRAALGEAIG RIDALSTLYR QSAPPEESAG HDLGDLVREI AETLVEASGR RDIALALDLV PLRVRPEAAG PLALIVNEVV SNAVRHAFPS RAGRLTVRIA RDGADVTVVV EDDGIGPSAT GDGSFEATLI DVLSRQVGGT IRVRPSDPAG TAVELRFPAE RIGV
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