Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3267 |
Symbol | gltD |
ID | 5835496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3626991 |
End bp | 3628424 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641369067 |
Product | glutamate synthase subunit beta |
Protein accession | YP_001640725 |
Protein GI | 163852682 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.534293 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGG TCACCGGGTT TCTCGAATTC GACCGGCAGG AGCAGAAGTA TCAGCTCGCC GCCGACCGCG TGCGGCACTT CCGCGAATTC ACGCTGCCGC TCGACGAGCA CGACCTGTCC AAACAGGCCG CGCGCTGCAT GGATTGCGGC ATCCCGTTCT GCCACGGGCC GACCGGCTGT CCGGTCCACA ACCAGATCCC GGACTGGAAC GACCTCGTCT ACCAGTCGGA CTGGGAGGAG GCCTCGCGTA ACCTCCACTC CACCAACAAT TTTCCGGAGT TCACCGGCCG CATCTGCCCC GCGCCCTGCG AGGAAGCCTG CACGCTGAAC CTCGAGAACC AGCCGGTCGC CATCAAGACG ATCGAGCAGG CGATCGCGGA TCGCGCCTGG AACATGGGCT GGGTGAAGCC CGAGCCGTCG GCGAACCGCA CCGGCAAGCG CGTGGCGGTG ATCGGTTCCG GCCCGGCCGG CATGGCGGCG GCCCAGCAGC TCGCCCGCGT CGGCCACGAC GTGCACGTCT ACGAGCGCGA GCCCAAGGCC GGCGGCCTGC TGCGCTACGG CATCCCCGAC TTCAAGATGG AGAAGCGCCA TATCGACCGG CGCGTGAAGC AGATGGAAGC CGAGGGCGTC GTCTTCCACT ACAAGGCCAA TATCGGGGTC AACGTGCCCC TAGAGGACCT GACGAGCCAG TTCGACGCCG TGCTGTTCTG CGGCGGCGCC GAGGATCCGC GCAACCCGCA GCTTCCGGGC CAGGAACTCG ACGGTGTGCA CTACGCCATG CCCTTCCTGG TGCAGTCGAA CCGCCGGGTC GGTGCCGAGC CGATGCCGGG CAACGGCGAA TTGCCGATCC TGGCCGCCGG CAAGAACGTC GTCGTCATCG GCGGCGGCGA CACCGCCTCG GATTGCGTGG GCACCTCGTT CCGCCAGGGC GCGCTCTCGG TCACCCAGCT CGACATCCGC CCGCGCCCGC CGGAGCGCGA GGACAAGCTG ACGGTGTGGC CCTACTGGCC GACCAAGATG CGCACCTCGT CGAGCCAGGC GGAGGGCGCC GAGCGCGAGT TCCAGGCCGC GACCCTACGG CTGGAGGGCA ACCGCAAGGG CCAGCTCACC GGCGTGGTCT GCGCCCGCGT CGATGAGAAG CGCCAGCCGA TCGAGGGCAG CGAGTTCGTG CTGCCGGCCG ATCTCGTCTT CATGGCGATC GGCTTTGCCG GCTCGGTGCA GAAGGGTCTG GTCGCGGAAT CGGGCGTGGC CGTGGACAAG CGCGGCAACG TCGCTGCCAA CGATCAGAAC TACCTGACCT CAAACCCGAA GATCTACGTC GCGGGCGACA TGCGCCGGGG CCAGTCCCTG GTGGTCTGGG CGATCCGCGA GGGCCGTCAG GCCGCCCGCT CGATCGACGA GGCACTGATG GGCGCGACCG TCCTGCCGTT GTAA
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Protein sequence | MGKVTGFLEF DRQEQKYQLA ADRVRHFREF TLPLDEHDLS KQAARCMDCG IPFCHGPTGC PVHNQIPDWN DLVYQSDWEE ASRNLHSTNN FPEFTGRICP APCEEACTLN LENQPVAIKT IEQAIADRAW NMGWVKPEPS ANRTGKRVAV IGSGPAGMAA AQQLARVGHD VHVYEREPKA GGLLRYGIPD FKMEKRHIDR RVKQMEAEGV VFHYKANIGV NVPLEDLTSQ FDAVLFCGGA EDPRNPQLPG QELDGVHYAM PFLVQSNRRV GAEPMPGNGE LPILAAGKNV VVIGGGDTAS DCVGTSFRQG ALSVTQLDIR PRPPEREDKL TVWPYWPTKM RTSSSQAEGA EREFQAATLR LEGNRKGQLT GVVCARVDEK RQPIEGSEFV LPADLVFMAI GFAGSVQKGL VAESGVAVDK RGNVAANDQN YLTSNPKIYV AGDMRRGQSL VVWAIREGRQ AARSIDEALM GATVLPL
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