Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3262 |
Symbol | |
ID | 5835401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3616783 |
End bp | 3618411 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641369062 |
Product | cytochrome c oxidase, subunit I |
Protein accession | YP_001640720 |
Protein GI | 163852677 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.128586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACCG CCACAGCACA TGCCGGGCAT GACGCCCACC ACGACCATAA GCCCTCCTTC TTCTCCCGCT GGTTCCTCTC GACGAACCAC AAGGACATCG GCACGCTCTA CCTGATCTTC GCCTTCATGG CGGGCATCAT CGGTGCGTTC CTGTCCTTCG GCATCCGCAT GGAGATGGAG GAGCCGGGGC TCCAGTACTT CTCCAACCCG GCGACCTACA ACGTGTTCGT CACCGGCCAC GGCCTCATCA TGGTGTTCTT CATGGTGATG CCCGCCCTCA TCGGCGGCTT CGGCAACTGG TTCGTCCCGC TGATGATCGG TGCGCCGGAC ATGGCCTTCC CGCGGATGAA CAACGTCTCG TTCTGGCTGA CGGTGTCGGG CTTCGCCTGC CTCCTCTGCT CGCTGTTCGT CGAGGGTTCG CCCGGTGCGA CCGGTGCGGG CACCGGCTGG ACCGTCTACC CGCCGCTGTC CTCCTCGGCC GGCCATCCCG GCCCGGCGGT CGATTTCGCG ATCTTCTCGC TCCACCTCGC CGGTGCGGGC TCGATCCTCG GCGCGATCAA CTTCATCACC ACCATCCTCA ACATGCGCGC CCCCGGCATG ACGCTGCACA AGATGCCGCT GTTCGCCTGG GCCGAGCTCG TCACCGCCTT CCTGCTGCTC CTGTCGCTCC CGGTTCTCGC CGGTGCGATC ACGATGCTGC TCACCGACCG TAACTTCGGC ACCACCTTCT TCGCCCCCGA GGGCGGCGGC GATCCGGTGC TCTACCAGCA CCTGTTCTGG TTCTTCGGTC ACCCCGAAGT GTACGTGATG ATCCTGCCGG CCTTCGGCAT CGTCTCGCAC ATCATCGCCA CCTTCTCGCG CAAGCCCGTC TTCGGCTACC TCGCCATGGC CTACGCCATG GTCGCCATCG GCGTCGTCGG CTTCGTCGTG TGGGCCCACC ACATGTACAC CGTCGGCCTG TCGCTCCAGA CGCAGTCCTA CTTCGTCTTC GCGACCATGG TGATCGCGGT GCCGACCGGC GTGAAGATCT TCTCCTGGAT CGCGACGATG TGGGGCGGTT CGATCCGCTT CACCGCGGCG ATGCACTGGG CGGTGGGCTT CATCTTCCTG TTCACGGTCG GCGGCGTCAC CGGCGTCGTG CTCGCGAACT CCTCGGTCGA TAAGTACCTG CACGACACCT ACTACGTCGT GGCGCACTTC CACTACGTGC TCTCGCTCGG TGCCGTGTTC ATCATCTTCG CCGGTATCTA CTACTGGTTC CCGAAGATGA CCGGCCATGT CATCCCGGAA TGGGCGGGCA AGCTGCACTT CTGGCTGGCC TTCATCGGTG CGAACGTCCT GTTCTTCCCG ATGCACTTCC TGGGTCTGGC CGGCATGCCG CGTCGCTACG CCGACTATCC GGAGGCCTTC GCGGGCTGGC ACAAGGTCGC GACCCTGGGC GGTCACGTCT TCGCCCTCAG CATGATCGTC TTCGTGATCG GCATCGTGCT GGCCTTCCGC TCCAAGACCC GCGCTGCGGA CAATCCGTGG GGCGAGGGTG CCACCACCCT GGAATGGACC CTCTCCTCGC CCCCGCCCTT CCACCAGTTC GAGACGCTCC CGAAGATCGT CGACGAGCCG GCCCACTAA
|
Protein sequence | MATATAHAGH DAHHDHKPSF FSRWFLSTNH KDIGTLYLIF AFMAGIIGAF LSFGIRMEME EPGLQYFSNP ATYNVFVTGH GLIMVFFMVM PALIGGFGNW FVPLMIGAPD MAFPRMNNVS FWLTVSGFAC LLCSLFVEGS PGATGAGTGW TVYPPLSSSA GHPGPAVDFA IFSLHLAGAG SILGAINFIT TILNMRAPGM TLHKMPLFAW AELVTAFLLL LSLPVLAGAI TMLLTDRNFG TTFFAPEGGG DPVLYQHLFW FFGHPEVYVM ILPAFGIVSH IIATFSRKPV FGYLAMAYAM VAIGVVGFVV WAHHMYTVGL SLQTQSYFVF ATMVIAVPTG VKIFSWIATM WGGSIRFTAA MHWAVGFIFL FTVGGVTGVV LANSSVDKYL HDTYYVVAHF HYVLSLGAVF IIFAGIYYWF PKMTGHVIPE WAGKLHFWLA FIGANVLFFP MHFLGLAGMP RRYADYPEAF AGWHKVATLG GHVFALSMIV FVIGIVLAFR SKTRAADNPW GEGATTLEWT LSSPPPFHQF ETLPKIVDEP AH
|
| |