Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3246 |
Symbol | |
ID | 5835519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3600696 |
End bp | 3604133 |
Gene Length | 3438 bp |
Protein Length | 1145 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641369046 |
Product | Sel1 domain-containing protein |
Protein accession | YP_001640704 |
Protein GI | 163852661 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00516483 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAAAAGG TCGTTTCAGT CCGATCCGCA GTCCGCCGTT TCACGCCTTG CGCGAAACGA TGGTCCGCCG GGCACCGGAA GCCGCCGACT TCGGATCTCC GCGAGATGAA ACAGACTGCC CCGATCAGCC TCGACAGCTT CGACCCGGAG GTACTCGCGG CTGCCCGCGA GGTCGCCCGG CGAGCGGGGG TGCCGCTGGA GAGCTGGATC GCCTCGGTGG CGACACCCGA CCCGTCGAAG CCGGGTCCGC GGCGGCGGCG CGCGGATGCG ACGTCCCCAG CCAGGGAGGC CGGCGCGGAG CCGGCCCGGC ACGTCGGAGG CCGGGCGCCG GAGAAGGCGC CCACGCCCGC CTCACGGAAG GACGGGCCAC AGCACAAGCG CCGGGAAGCC ACTCAGGGCG CTTCGGCCGC CGAGGCGTCC GCAACGACAT CGCTGGAAGC CTCGCTCGGC GCGATGATGC GGCGGCTCGA CGCCCTCGAC CGCTCGATCA GCGAGGAGCG CGAGGCCTCC AAGGCCGATG CCGCCCGGAT GATCGACGAG ATCGAGGCGC GGTTGACCAC CGCCCGCCAG CCCGTCGCAC CGGAAATGAT CGCCGGACGC ATCGCCGACA TCGAACGCAA GATGGGCGAG ATCGCCGGCC AGCTCGACAC GCCCCGCCCG CTGGGTCGGC GCGGGCGCCC GCTCGCCACC GAGGTCCGCG ATGCCGTCGC CGAGGTGCGC CGCCGCCAGC GCGAGCTGGA AGAGGGCATC GCCGAGTGGA ACGCCGCCAG CGCGGGAGAA TTGAAGGACC GGCCGCAGGA TGGCCCGGCC GCACTTGCGG TGACGCCTGC CGAGGAAGGC TCCGGCCAGG AGCCGTCCCC GGCCATCGCC GAACTGCAAC GCGAGACGAA CCGGCTGCGC GACGCGCTCG GCAGCCTCGC CACCGGCCGC GACGTCAGCG AGCTGGAGCG GACCATGCAG GCCGTCGCCA GCGACCTTCA GCGGGCGCGT GCCCCGCAGG AGCTCGCCGC CATCGCCGCC CCGGTCGAGC TGATGCGCCT CCAAGTGGAG CGGATCGCCG AAGACGTGGC GGACAACGTC CATGCCCGCA TCGCGGGTGA GGTCGAGCGC TTGGCCGGGA AGGTGGATGC CGTTCTCTCC GGCGTCTTGT CCGGCCCCGC CGACCAGAGC GCCCTCGACG GCGTGTTCCG CGAACTCGAC GAGATCCGCC GCCTCGTGGC GTCCCTGGCA GGGCCGGAGC GCATCCAGAG CCTCGCCCAG GGCGTGCAGG CAATCAGCGC CCAGATCACC CAGCTTCAGC GGGACGAGGA TGCGGGTATC GCCACCCTCA AGCCGCTGCT GGAGGAGATC CGCGGCGAAC TGAAGGCGCC CGATTCATCT CGCGAGCTTC CCGGCGCGCT TCTCGGACGT TTCGAAGCGC TCGCGCAGCG GCTCGATGGC GCCGAGTCCG GCTCCGTCGG CGAGCTGATC GAGCGGCTCG AAGGCGTGGC TGAAAAAGTC GACCGCGTCA GCGCGGGCGG CAGCGGGCTC GATGCCCTGG AGCGCCACGT CCTCGCCCTG GCGAGCCGGC TCGAAGCGCC GCGCGACACC GATCCGGCCG TGGCGCGCCT CGAGCGCTCC ATGGGCGACC TGCTCGCCCA GGTCACGGCC CTGCGCAACG GAACCGATCT GGAGGCCACC GTCGCGCAGG CGGTCCGTGA GGCCGTGGCG GGCTCGACCG CCCCGCTCGC GGCCGGCGGC GGTTTCGAGC TGCTGCGGGC CGATCTCGCC GAGATGCGGG CCAACCAGAA GGGCGCGGAC CAGCGCCTCC AATCGACGAT GGAAGGCGTC CAGTCGGTGC TGATGCGGCT GAGCGAGCAG CTCGACCGCA CCATGACCTC GTCCGCGGCC CTCACCGCCG CCGCCCCGCA GGAGCGCGCG CCCGTCGTGC TGTCCTCGGC CGAGCGCGTC TCGCACGAGC GCCCCGCCGC CCCGAAGACG GCTGCCAAGC CGTCATCCGA GCCGTCGTCC CAGAACCTTG CCCGCCCGAA CCGCACCGCA TCCTCCGACG AGGCCGGCGG GACGGAGGCG AGCCGCCTGT CCGACGAGTT GCTGGAGCCC GGTGCCGGCC GGCCCGGATC CGGCCGCCCG GCCGCGCCGG AGGCGAGCCC CGCCGCGACC GGCGGCGCCG ACATCAAGAC CAGCTTCATC GCCGCCGCGC GGCGCGCGGC GCAGGCCGCG CAGGCCGAAT CGGCCACCGA GGCGCCACTG ACGGCGCGGC TGCGCGACAA GGTCGCTCCG GCCCGCATGC CGGGCGCGGA GACGACGCCC CTCTCGCGGA TCCGCGGTGC CCTCGACAGC CGCCGCCGCA CGCTCCTGCT CGGCCTTGCC GCTGTGGTGC TGGCGCTCGG CGCCTACCAA GCCTTCGTCG CGGGCAAGGG CACTCCGACC GGAACTCCGA CCGGCGACCC GGCCGCGCCG GAGGCTCGTC CGGTGGCGAG CACCGCCCCG GCGGCCTCCG CCGACGTCGC CGCGAGCCGC ACCGAGACCA CGGCCGAGCC CGCTCAGGCG GCGTCGCAGA CCCAGGCTCC GTCCGAGACT TCCCCCCAGA CCGGGACATC CGCCCAGACG ACGCCCGACC CGGCGACGAC CCAATCCATC GCCGAGCCGA AATCCGCGCC GGCCAAGCGC GGGCTGCCCC AGGTCGCGGG CATGAGCACG CTCGGCCCCG ACCTTGCCGG CCTGCCGCCG GCCCTGGCCA AGCTCAAGCA GGATGCGCTC GACGGCGACG GCGCCGCGGT CTGGGAGATC GCCTCCCGCG AGGCCGAAGG CCGGGGCGTG ACGCGCGACC TCGTGGTCGC CGCCAAGCTC TACGAGCGGC TCGCGAATGC CGGCTACGCG CCGGCTCAGT TCAAGGTCGG CAACGCCTAC GAAAAGGGCT CGGGCGTGGT CCGGGACATC GAGAAGGCGA AGGCGTGGTA CGGCCGCGCC GCGGATCAGG GCAACATCCG CGCGATGCAC AACCTCGCCG TGCTGCATGC CGAGAACCCG GCGGCCAACG GCAAAGCGGA TTTCGTGACC GCCGCGAACG CCTTCCGCCG GGCGGCGGAA CACGGGGTGC GCGACAGCCA GTACAACCTG GCCGTACTCT ACGCCCGCGG TCTCGGCGTC GGACAGGATC TCGTCCAGTC CTATCTCTGG TTCTCGGCCG CTGCCACGCA GGGGGACCAG GAAGCGGGCC GCAAGCGGGA CGAGGTCGCC GCCAAGCTCT CGCCGAAGGA TCTCACCGAA GCCAGGAGCC TCGCAGCGGG CTTCAAGGCG AAGGCCGTCG ATCCGGCCGC GAACGAGGCC CCGTCCCAGA AGGCTACCGC CGCAGCGGGG ATGTCTCTGA TGGGCGCGCC GTCGCCGGGC ATGCCGACCG CCGCTTCCCC ATCGGCGCAG AAGCGGTTCG GGGTCTGA
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Protein sequence | MEKVVSVRSA VRRFTPCAKR WSAGHRKPPT SDLREMKQTA PISLDSFDPE VLAAAREVAR RAGVPLESWI ASVATPDPSK PGPRRRRADA TSPAREAGAE PARHVGGRAP EKAPTPASRK DGPQHKRREA TQGASAAEAS ATTSLEASLG AMMRRLDALD RSISEEREAS KADAARMIDE IEARLTTARQ PVAPEMIAGR IADIERKMGE IAGQLDTPRP LGRRGRPLAT EVRDAVAEVR RRQRELEEGI AEWNAASAGE LKDRPQDGPA ALAVTPAEEG SGQEPSPAIA ELQRETNRLR DALGSLATGR DVSELERTMQ AVASDLQRAR APQELAAIAA PVELMRLQVE RIAEDVADNV HARIAGEVER LAGKVDAVLS GVLSGPADQS ALDGVFRELD EIRRLVASLA GPERIQSLAQ GVQAISAQIT QLQRDEDAGI ATLKPLLEEI RGELKAPDSS RELPGALLGR FEALAQRLDG AESGSVGELI ERLEGVAEKV DRVSAGGSGL DALERHVLAL ASRLEAPRDT DPAVARLERS MGDLLAQVTA LRNGTDLEAT VAQAVREAVA GSTAPLAAGG GFELLRADLA EMRANQKGAD QRLQSTMEGV QSVLMRLSEQ LDRTMTSSAA LTAAAPQERA PVVLSSAERV SHERPAAPKT AAKPSSEPSS QNLARPNRTA SSDEAGGTEA SRLSDELLEP GAGRPGSGRP AAPEASPAAT GGADIKTSFI AAARRAAQAA QAESATEAPL TARLRDKVAP ARMPGAETTP LSRIRGALDS RRRTLLLGLA AVVLALGAYQ AFVAGKGTPT GTPTGDPAAP EARPVASTAP AASADVAASR TETTAEPAQA ASQTQAPSET SPQTGTSAQT TPDPATTQSI AEPKSAPAKR GLPQVAGMST LGPDLAGLPP ALAKLKQDAL DGDGAAVWEI ASREAEGRGV TRDLVVAAKL YERLANAGYA PAQFKVGNAY EKGSGVVRDI EKAKAWYGRA ADQGNIRAMH NLAVLHAENP AANGKADFVT AANAFRRAAE HGVRDSQYNL AVLYARGLGV GQDLVQSYLW FSAAATQGDQ EAGRKRDEVA AKLSPKDLTE ARSLAAGFKA KAVDPAANEA PSQKATAAAG MSLMGAPSPG MPTAASPSAQ KRFGV
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