| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3237 |
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| Symbol | |
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| ID | 5835410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 3590319 |
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| End bp | 3592160 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641369037 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_001640695 |
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| Protein GI | 163852652 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.330095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.222492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGACT TCGCCCACCT TCTCGACCGC CTCGCCTACG AGCCGCGCCG CAACGCCAAG
CTGCGCCTAC TCCAGGATTT CTTCGCCGGC ACCCCCGACC CGGAGCGCGG CTGGGCGCTC
GCCGCCATGA CCGGCGGCCT CACCTTCCGC GAGGCCAAGC CGGCGCTGAT CCGCGGGCTG
GTGGAGGAGC GGGTCGATCC GGTGCTGTTT TCGCTCTCGC ACAACTATGT CGGCGATCTC
GCCGAGACGA CGGCGCTGAT CTGGCCGGGG CCAGAGGAGA CCCCCTCTCT CCGCATGCGG
GGAGAGGGGG CCTTGAAGGA CGAGGCTCTT TCGGAATCGC CCCCTCACCG TCGCCTGCCG
GCTCGCACTG CCGACGAGGT CACCGAATCC CTCTCCCCGC AAACGGGGAG AGGGGATCCC
CCCGGTCCGG GCCACAACAA CCCGCCGCCC TCCGTCCCCA CCCTCGCCGA GGTCGTCGAA
ACGCTCGCCT CCACCCCGAA GCGCGAACTG CCTCAGCATC TCGCCCACTG GCTCGATGCC
CTCGACGAGA CCGGGCGCTG GGCGCTCCTC AAGCTCGTCA CCGGTAATCT GCGCGTCGGC
GTCTCGGCCC GTCTGGCCAA GACGGCGGTG GGCGTGCTCG GCGGCCACGA GGCGGATGCG
GTCGAGGAAG TCTGGCACGG GCTGAAACCG CCCTACACCG AGCTGTTCGC CTGGGTGGAG
GGACGGGGCG AACGGCCGGA GAGCCGCAAC CCGGCCCCGT TCCGGCCGCC GATGCTCTCG
CACCCGGTGG AAGAGTTCGA AGACCTCGAC AAACTCGAAC CGGAGGCGTT CTCGGCGGAG
TGGAAATGGG ACGGCATCCG CGTCCAGCTC GCGGGCGGGC GCGACGGCCA GGGCCGGCAG
GTACAAAAGG TCTATTCGCG CACCGGCGAG GACATTTCCG ACGCGTTCCC CGACCTCGCC
GAGGCGATCA CCTTCGACGG CGCGATCGAC GGCGAACTGC TGATCCTGCG CGAGGGGCGG
GTCCAGAGCT TCAACGTGCT CCAGCAGCGG CTCAACCGGA AGGCGGTGAC GGGCAAGCTC
CTGGAGGAGT TCCCGGCCCA TGTCCGCGCC TACGACGTGC TGGCGGCCGA GGGCGAGGAC
TTGCGCCCGC TGCCCTTCGC CGAGCGCCGT CCTCGGCTGG ATGCCCTGGT GCGGCGGCTC
GACCATGCCC GGATCGATCT CTCGCCGCTC GTCCCCTTCA CCACCTGGGA CGAGGTGGCC
GCCGCCCGCG CCGACCCGGC CTCGGCGGGG GCCGGCGCGG ATGCCGACGC CATCGAGGGC
GTGATGCTCA AGCGGCTCAA CAGCTCCTAC CTGCCGGGCC GCCCCAAGGG CCCGTGGTGG
AAGTGGAAGC GCGAGCCCTA CGTGGTCGAT GCGGTGATGA TGTACGCCCA GCGCGGGCAC
GGAAAGCGCT CGTCCTTCTA CTCGGACTAC ACCTTCGGCT GCTGGCGCGA GGGGGCGGAA
GGCGAGGAGC TGGTGCCGGT CGGCAAGGCC TATCACGGCT TCACCGATGC CGAGCTGCAG
AAGCTCGATC GCTACGTCCG CAACCATACG ACCAAGCGCT TCGGCCCGGT GCGCGAGGTC
GCCTATGGCC GCGAGGCCGG GCTGGTGCTG GAGATCGCCT TCGAGGGCGT GCAACGCTCG
ACGCGGCACA AATCGGGCGT GGCGATGCGC TTCCCCCGCG TCAGCCGCAT CCGCTGGGAC
AAGCCGGCGG CGGAGGCCGA CCGGGTCGAT GTGCTGGAAC GGATCCTGGC GCGCGGCGAG
CGCGAGGTCG CGCCGGGCGC GGCGATGGAG GCATCGGAAT GA
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| Protein sequence | MNDFAHLLDR LAYEPRRNAK LRLLQDFFAG TPDPERGWAL AAMTGGLTFR EAKPALIRGL
VEERVDPVLF SLSHNYVGDL AETTALIWPG PEETPSLRMR GEGALKDEAL SESPPHRRLP
ARTADEVTES LSPQTGRGDP PGPGHNNPPP SVPTLAEVVE TLASTPKREL PQHLAHWLDA
LDETGRWALL KLVTGNLRVG VSARLAKTAV GVLGGHEADA VEEVWHGLKP PYTELFAWVE
GRGERPESRN PAPFRPPMLS HPVEEFEDLD KLEPEAFSAE WKWDGIRVQL AGGRDGQGRQ
VQKVYSRTGE DISDAFPDLA EAITFDGAID GELLILREGR VQSFNVLQQR LNRKAVTGKL
LEEFPAHVRA YDVLAAEGED LRPLPFAERR PRLDALVRRL DHARIDLSPL VPFTTWDEVA
AARADPASAG AGADADAIEG VMLKRLNSSY LPGRPKGPWW KWKREPYVVD AVMMYAQRGH
GKRSSFYSDY TFGCWREGAE GEELVPVGKA YHGFTDAELQ KLDRYVRNHT TKRFGPVREV
AYGREAGLVL EIAFEGVQRS TRHKSGVAMR FPRVSRIRWD KPAAEADRVD VLERILARGE
REVAPGAAME ASE
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