Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3191 |
Symbol | |
ID | 5831517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3543190 |
End bp | 3544080 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641368991 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001640649 |
Protein GI | 163852606 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.393919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA CCCACGCCCG CCTTCGCGGC TCGATGACCG CGCTCGCGAC CCCGTTCCGC GACGGCGAGT TCGACGAGTT GGCCTTCCGG AAATTCGTGA ACTGGCAGAT CGATCAGGGC ACCCACGCCC TGGTGCCGAC CGGCACGACG GGCGAGAGCC CGACGCTGAG CCACACCGAG CACGACCGCG TGGTCGAGGT GTGCGTCGCC GAGGCCGCCG GCCGGGTGCC GGTGATCGCG GGCGCCGGCT CGAACTCGAC GCGGGAGGCC GTCGCGCGGG CGCGTCATGC CGAGAGCGTC GGCGCGGATG CGGTGCTCAC CGTCACGCCC TACTACAACA AGCCGACGCA GGAGGGGATG TACGCCCACT TCAAGGCGGT GAACGACGCC GTCGGCATCC CGATCATCAT CTACAATATC CCCGGCCGGT CCGTGGTCGA CATGAGCGTC GACACCATGA AGCGGCTGTT CGAACTGAAG AACATCGCCG GCGTGAAGGA TGCCACGGCC AAGATTGACC GTGTCAGCCT CCAGCGACAG GCTTTGGGAG AAGACTTCAT CCAGCTTTCT GGCGAAGATG CGACGGCGCT CGGCTTCAAT GCCCATGGCG GGGTCGGCTG TATCTCCGTG GTCTCGAATG TCGCACCCCG GCTCTGCGCT GATCTTCAGG AGGCGACGCT GGCGGGCGAT TACGCCAAGG CCCTGAAGAT CCAGGACCGG CTGATGCCGC TGCACGTGCA GATGTTCTAC GAATCGAACC CGGTGCCGGC GAAATACGCT CTCTCGCGCC TCGGGCTGAT GTCGGAGGAG GTGCGCCTGC CCCTGGTGCC GGCGACCGAG GGCTGCCGCC GGGCGATCGA TGCCGCGCTC AGCCATGCCG GCCTGATCTG A
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Protein sequence | MTDTHARLRG SMTALATPFR DGEFDELAFR KFVNWQIDQG THALVPTGTT GESPTLSHTE HDRVVEVCVA EAAGRVPVIA GAGSNSTREA VARARHAESV GADAVLTVTP YYNKPTQEGM YAHFKAVNDA VGIPIIIYNI PGRSVVDMSV DTMKRLFELK NIAGVKDATA KIDRVSLQRQ ALGEDFIQLS GEDATALGFN AHGGVGCISV VSNVAPRLCA DLQEATLAGD YAKALKIQDR LMPLHVQMFY ESNPVPAKYA LSRLGLMSEE VRLPLVPATE GCRRAIDAAL SHAGLI
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