| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3138 |
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| Symbol | |
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| ID | 5835542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 3488207 |
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| End bp | 3490483 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641368939 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001640597 |
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| Protein GI | 163852554 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.157891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA CCGACAGGAC TGCGACGCCG AGGCCGCGCA CATCGCGCAC GCGTATCCGC
GAAGGCTCGC CGCATCCCCG CGGTGCGACC TGGGACGGCC GCGGCGTAAA CTTCGCGCTG
TTCTCGGCCC ATGCCACGAA GGTCGAGCTG TGCCTGTTCG ACGATGCCGG CGAGAACGAA
ATCGAGCGCA TCGAGCTGCC CGAGTACACC GACGAGGTCT GGCACGGCTA CCTGCCGGAC
GCGCGCCCCG GCACGATCTA CGGCTACCGC GTCCACGGCC CCTACGAGCC CGAGGCCGGC
CACCGCTTCA ATCCGAACAA GCTCCTCATC GACCCCTACG CCAAGGGCCT GGTCGGCACG
ATCCAGTGGA ACCCCGCCCT GTTCGGCTAC AAGATGGAGA CGGGCGACGA CCTCACCTTC
GATGAGCGCG ACTCCGCGCC CTACACCCGC CGCTCGCGCG TGATCGACCC GGCCTTCACC
TGGGGCCGGG ATGTGAAGCC GCGCGTGCCG TGGGAGCGCA CGATCATCTA CGAGACCCAC
GTGAAGGGGT TCACCAAGCT GCACCCGGCA GTGCCGGAGA AGCTGCGCGG CACCTATGCC
GGCCTCGGCA ACCCGGCGGT CCTCGACTAC ATCAAGAGCC TCGGCGTCAC CTCGGTCGAG
CTGCTGCCGG TCCACTCCTT CGTGCAGGAC GACTATCTGC AACAGAAGGA CCTCATCAAT
TACTGGGGCT ACAACACCAT CTCGTTCTTC ACGCCCGCCC GGCGCTACGC GGCGGTGCCG
GACTTCGCCT TCTCCGAGTT CAAGGAGATG GTCGCGCGCA TGCACGGCGC CGGCCTCGAG
GTGATCCTCG ACGTGGTCTA CAACCACACG GCCGAGGGCA ACGAGAAGGG CCCGACCCTC
TCGTTCAAGG GCGTCGACAA CGCCTCCTAC TACCGCCTGC TGCCGAACCA GCCGCGCTAC
TACATCAACG ACACCGGCAC CGGGAACACC TTCAACCTCT CGCATCCCCG CGTGCTGCAG
CTCGTCACGG ACTCGCTCCG TTACTGGGCG ACCGAGATGC GGGTCGACGG CTTCCGCTTC
GATCTGGCCA CCATTCTCGG CCGCGAGCCC TACGGCTTCG ACGAGGGCGG CGGCTTCCTC
GACACCTGCC GTCAGGACCC CGTCCTCAAC GACGTGAAGC TCATCGCCGA GCCGTGGGAT
TGCGGCCCCG GCGGCTATCA GGTCGGCGGC TTCCCGCCGG GCTGGGCCGA GTGGAACGAC
CGGTTCCGCG ACGACGTGCG CGGCTACTGG AAGGGCGATG CCGGGCTGCT GCCGGGGCTC
GCCTCGCGCA TCACCGCCTC GGCCGACAAG TTCAACAAGC GCGGTCGCCG GCCCTGGGCC
TCGGTGAACT TCATCACCGC GCATGACGGC TTCACGCTCA ACGACACGGT TTCGTACAAC
GAGAAGCACA ACGAGGCGAA CGAAGAGGGC AACCGCGACG GGCACGGCCA CAACCTCTCC
TACAATTACG GCGTCGAGGG CCCGACCGAC GATCCCGAGA TCCGCTCGGT TCGTTTGCGC
CAGATGCGCA ACATGCTGGC GACCCTGTTC CTGTCGAAGG GCACGCCCAT GCTGCTGGCC
GGCGACGAGT TCGCCCGCAC GCAGAAGGGC AACAACAACG CCTATTGCCA GGACAATGAG
GTGAGCTGGG TCGATTGGGG CGCCATCGGC GAGGAGGAGC GGGATCTGGC CGAGTTCACA
CAGCGCCTGA TCCTGCTGCG CAACGCCCTG CCGATGCTCT CGCGCGGACG CTTCGTCACG
GGAGCCTACG ACGAGGAGTT CGGCGTCAAG GACGTGACTT GGCTCACGCC CACCGGCACC
GAGATGAGCC CGGAGAACTG GAACGACGGC AACTCGCGCA CCCTCGCCGT GCTGCTCGAC
GGGCGCGCCC AGGCAAGCGG CATCCACAAG CGCGGCGGCG ATGCCACCCT GCTGTTGTTC
TACAACGCCT ATCACGACGT GGTGGACTTC ACTCTCCCCG AGGCGCCGGG CGGCACGTCC
TGGACGCGGC TGCTCGATAC CAACCTGCCC GACAGCCAGG AGGTGGAGAG CTTCGCCGTC
GGCGAGAGCT ACTCGGTCAC GGGGCGCTCG ATGCTGATGT TCGTCCTCAA GCCCGTCGAG
AACGAGGACG AGGACGAGGA GCACAGCGAC ATGGAGCGCT CCTACCAGTA CGTGATGCAG
GCCTTCGAGC GGGCGAATGT CGAGAGCGTG AGCTTCGGCA TCGACGAGGA GGCCTGA
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| Protein sequence | MADTDRTATP RPRTSRTRIR EGSPHPRGAT WDGRGVNFAL FSAHATKVEL CLFDDAGENE
IERIELPEYT DEVWHGYLPD ARPGTIYGYR VHGPYEPEAG HRFNPNKLLI DPYAKGLVGT
IQWNPALFGY KMETGDDLTF DERDSAPYTR RSRVIDPAFT WGRDVKPRVP WERTIIYETH
VKGFTKLHPA VPEKLRGTYA GLGNPAVLDY IKSLGVTSVE LLPVHSFVQD DYLQQKDLIN
YWGYNTISFF TPARRYAAVP DFAFSEFKEM VARMHGAGLE VILDVVYNHT AEGNEKGPTL
SFKGVDNASY YRLLPNQPRY YINDTGTGNT FNLSHPRVLQ LVTDSLRYWA TEMRVDGFRF
DLATILGREP YGFDEGGGFL DTCRQDPVLN DVKLIAEPWD CGPGGYQVGG FPPGWAEWND
RFRDDVRGYW KGDAGLLPGL ASRITASADK FNKRGRRPWA SVNFITAHDG FTLNDTVSYN
EKHNEANEEG NRDGHGHNLS YNYGVEGPTD DPEIRSVRLR QMRNMLATLF LSKGTPMLLA
GDEFARTQKG NNNAYCQDNE VSWVDWGAIG EEERDLAEFT QRLILLRNAL PMLSRGRFVT
GAYDEEFGVK DVTWLTPTGT EMSPENWNDG NSRTLAVLLD GRAQASGIHK RGGDATLLLF
YNAYHDVVDF TLPEAPGGTS WTRLLDTNLP DSQEVESFAV GESYSVTGRS MLMFVLKPVE
NEDEDEEHSD MERSYQYVMQ AFERANVESV SFGIDEEA
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