Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3118 |
Symbol | |
ID | 5835163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3468027 |
End bp | 3469697 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641368918 |
Product | cyclic peptide transporter |
Protein accession | YP_001640577 |
Protein GI | 163852534 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.150881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.779975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCAGG ACGGCACAAT CCTTCGTCAT TTCCGGCACG ACGCGATCCG GCTGCTCCGG CCGGTCTGGC CGCTGGTGAG CGTGGCCACA GCGCTCGGGG CGGTCGGCGG CCTTGCCACC GCCGCGGCTC TGGCCAAGAT CAACGAGGCC TTCTACGGCG AGGGCGCGCT CGCCGACGGC GTGTTGCTGG CGTTTGCCGG GTTCGCGGCC TTGAGCGTTC TCGGCACGTT TGCGGCCAGT TTCGGCAACA GCTACGCGGG CGGACGCATC CAGGCGGCGC TCAGCCGCGA CCTCACCGAT AAGATCCTGA CCGCGCCGAT CGAACGGATC GAGCGCCTCG GCAAGCACAA GCTGCTCGCC TCGCTTCAGG GCGACGTGAC CACCATCTTC ACAGCCATCG CGTTCCTCTC GCCGATGGTG GTCGCGGGCG GGACGCTCAT CGGTTGCGCG GCCTACATGA TCCTCCTGTC ACCCGCCCTC TCGGCGGTGA CGGCGGCGGT CCTGATCCTC GAGAGCCTCG GCGCGAACGC CCTGCGCCGG AACATGCTCC GGTCCTTCGA GGAGGTTCGC AAGAACCGCG AGGCGACCCA GAAGCACTAC CTCACCCTCA CCGAGGCGGC GAAGGAGTTG CGCATCGGCC GCGAACGCCG GCTCCACCTC CGCGACGTCG CCCTCAGTGC CTGCATCGAG CAGGGGCGCC ATTTGATGAC GCGGATCGCC GTCATCCAGC AATCGCTGTC GATGCTGAGC CAATCGACCA ACTTCCTGCT GTTCGCCGGT CTCATCGCCT ACAAGGTCCT GGCCGGCATC AGCGGCGCCG AACTCTCCGG CTTCGTGCTC GTGCTGCTCT ACATCCAGGC GCCGATCGGC CAGCTCATCC ACTTCGTGCC GATGATCGGG CAGGCCCAAG TGGCCTACCG GCGCATCGCC GAGTTCTCGG AAGAGGGAGC GGAGGCGGAA GCCGGCCTGC TCGCTGCCAC GCCGTCGGAG GCGGGCCGCC GCATCCGTGA GATCACCCTG CGCGGCGTCA GCCACGGCTT CCCGGCGGCC GGCGACAAGG CCCCCTTCGC CCTCGGCCCG CTCGACCTGA CGATCCGGGC CGGCGAGATC CTGTTCATCG TCGGCGAGAA CGGCTCGGGC AAGACGACGC TGATCAAGCT GCTGCTCGGT CTCTACCCGC CGCAAACGGG AGAGATCCTG CTCGACGGCA TTCCGGTGAC GGCAGGGACG CGCGACGCCT ACCGCCAGCA CTTCTCGGCG ATCTTCTTCG ACTACCACCT GTTCGACGAG CTGATCCCCG CCGACGGTGC CGGCCCGGAG GCCGCCCGGC CCCTGCTGGA ACGGCTCGAT CTGGCCCACA CGGTCGGCAT CAGCGAGGGA CGCTTCTCCA CCACCGAGCT CTCGACCGGC CAGCGCAAGC GCCTCGCCCT GGTCCAGGCC GTTCTCGAAG GACGCCCGGT TCTCGTGCTG GACGAGTGGG CAGCGGAACA GGATCCGACC TTCCGGCGCC GCTTCTACGA GGCGCTTCTG CCGGACCTGC GAAGCGGCGG CCGAACCCTC ATCGTCATCA GCCACGATGA CCGCTACTTC GACGCCGCCG ACCGGGTGCT GCACTTGGCG GAAGGACGGA TCGTGGAGAT CACGGAGAGG GCTGTGGCCG AGCCGGCCTG A
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Protein sequence | MGQDGTILRH FRHDAIRLLR PVWPLVSVAT ALGAVGGLAT AAALAKINEA FYGEGALADG VLLAFAGFAA LSVLGTFAAS FGNSYAGGRI QAALSRDLTD KILTAPIERI ERLGKHKLLA SLQGDVTTIF TAIAFLSPMV VAGGTLIGCA AYMILLSPAL SAVTAAVLIL ESLGANALRR NMLRSFEEVR KNREATQKHY LTLTEAAKEL RIGRERRLHL RDVALSACIE QGRHLMTRIA VIQQSLSMLS QSTNFLLFAG LIAYKVLAGI SGAELSGFVL VLLYIQAPIG QLIHFVPMIG QAQVAYRRIA EFSEEGAEAE AGLLAATPSE AGRRIREITL RGVSHGFPAA GDKAPFALGP LDLTIRAGEI LFIVGENGSG KTTLIKLLLG LYPPQTGEIL LDGIPVTAGT RDAYRQHFSA IFFDYHLFDE LIPADGAGPE AARPLLERLD LAHTVGISEG RFSTTELSTG QRKRLALVQA VLEGRPVLVL DEWAAEQDPT FRRRFYEALL PDLRSGGRTL IVISHDDRYF DAADRVLHLA EGRIVEITER AVAEPA
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