Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3077 |
Symbol | |
ID | 5835469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3423012 |
End bp | 3423740 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641368878 |
Product | integrase family protein |
Protein accession | YP_001640537 |
Protein GI | 163852494 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.486947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCATCA GCCTGTCGTC CATCGTGACG GAGGCGCAGC GACGCGGGCT TGTCACCGTC AACAACGTCC GCAGCGCCAA GCCGGTGAAG CGCTCCGGCC GTGAGGACAC ACGGCCCGTC ATGCCGACGA AGGCCGAGCT CAAGGCGATC ATCAAGGCAA CACCCGATCG CTCGCGGCCG ATGATTCTCA CGCTCCTGTT CGCGGGCCTA CGGGGTTCGG AGATGCGCGG GCTGTTGTGG GAGGACGTGG ACTTGAAGCG CGGCGTGCTT CACGTCCGGC GGCGGGCGGA CCGCTTCAAC AGCTTCGGGC CGCCCAAGTC GAAGGCTGGC ATCCGGGACA TCCCATTGCC GCCCACCCTG CTTCACGATC TCAAGGCGTG GCGACTGGCC TGCCCGAACG GTCCGCTGGG GCTAGTCTTT CCAACCACGG CCGGCACAGT CCAGGGCCAC GCGAACATCC TGCATCGGGT GTTCTGGCCC CTCCAAGTCG CAGCAGGCGT CACGATGCCC GGGCCCGATG GCCAGCCCAA GGCGAAGTAC GGTCTCCACG CCCTACGCCA CGCGTCGGCT GCCCTCTGGA TCGAACAGGG CCTCAATCCC AAGCGGATCC AGACCCTGAT GGGGCACGCC TCGATCCAGC AGACGATGGA TCGATACGGC TACCTGTTCG AAGCGCGCGA GGATGACACG GCCATGCTGG CAGGGCTCGA ATCCGGCCTC TTCAACTGA
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Protein sequence | MLISLSSIVT EAQRRGLVTV NNVRSAKPVK RSGREDTRPV MPTKAELKAI IKATPDRSRP MILTLLFAGL RGSEMRGLLW EDVDLKRGVL HVRRRADRFN SFGPPKSKAG IRDIPLPPTL LHDLKAWRLA CPNGPLGLVF PTTAGTVQGH ANILHRVFWP LQVAAGVTMP GPDGQPKAKY GLHALRHASA ALWIEQGLNP KRIQTLMGHA SIQQTMDRYG YLFEAREDDT AMLAGLESGL FN
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