Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3050 |
Symbol | fliM |
ID | 5835524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3392785 |
End bp | 3394005 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641368850 |
Product | flagellar motor switch protein FliM |
Protein accession | YP_001640510 |
Protein GI | 163852467 |
COG category | [N] Cell motility |
COG ID | [COG1868] Flagellar motor switch protein |
TIGRFAM ID | [TIGR01397] flagellar motor switch protein FliM |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.722378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGGCC CCGAAGACGA GCTGGAGGAC GATTGGGCGG CCGCCTTTGC CGAGCAGGGC GGCGAGGGCG GTGGCGGCGA CGCGTCGCTG GCCGAGGAAT GGGGCGCGGC GCTCGCTGAG CAGGGCACGA CCAAGAGTGC CGGCGACGTC GCCGCCGAAT GGGCGACGAT GATCGAGGAC GGGGAGACCG AGAATCTCCC CGAACTCGCC GGCAACGACC GCATCCTGAA CCAGGATGAG ATCGACGGCG TCCTCGGCTT CTCCCTGCGC GAACTCTCCG CCTCCGGCGC GGGGGGCGTG CGCGCCATCG TCGATTCGGG CGTCGTTCAG TACGAACGCC TGCCGATGCT GGAAATCGTC TTCGACCGGA TGATCCGGTT GCTGTCGACC AGCCTGCGCA ACTTCTTCCA GGACAACGTC GAGGTGACCC TCGACAACAT CACCTCGGTC CGGTTCGGCG ACTATCTCAA CGCGATCCCG CTCCCGACCC TGCTCGGCGT GTTCAAGGCC GATGCCTGGG AGGGCTCGGG CCTCGTCACC GTGGAGCAGA CGCTCGCCTA CTCGACCATG GACCTCCTGC TCGGGGGCAA GCGCGGCGGC TCGTCGAGCC GGCTCGACGG GCGGCCCTTC ACCACGATCG AGATGAGTCT CGTGCGCCGC CTGGTCGAGA TCATTCTCAC GGACCTCGAA CTGTCGTTCC AGCCGCTCTC GCCGGTGCGG TTCGGCATCG ACCGCATCGA GACCAACCCG CGCTTCGCCA CCATCACCCG GCCCGGCAAC GCCGCGATCC TGATCACGCT CAAGCTCGAC ATGGACGGGC GCGGCGGCGG GATGCAGATC CTGTTCCCCT ACGCGACGGT CGAGCCGATC CGTGACCTGC TGATGCAGAG CTTCATGGGC GAGCGGCTCG GGCGCGACCA GGTCTGGGAA AGCCACCTCG CCACCGAGAT CTGGCAGGCG GACGTGGACA TGGAGGCGGT GCTGCACGAG GTGACGCTGC CCCTGAAGCG GGTGCTCAAC CTCAAGGTCG GCGACACGCT GATGTTCGAC CGCAAGCCGT CCGACCTCAT CACCGTGCGC TGCGGTGACT GGGCGCTGAC GCAAGGGCGG ATCGGCCGGA TCGACGATGC GATCGCGGTG CAGATCGCCC GGCCGCTGCG GCAGTCCCGC ACAACGCTGC AGGCCTACGA GATCTCCATG CAGAACCGTA ACGACGGGTA G
|
Protein sequence | MIGPEDELED DWAAAFAEQG GEGGGGDASL AEEWGAALAE QGTTKSAGDV AAEWATMIED GETENLPELA GNDRILNQDE IDGVLGFSLR ELSASGAGGV RAIVDSGVVQ YERLPMLEIV FDRMIRLLST SLRNFFQDNV EVTLDNITSV RFGDYLNAIP LPTLLGVFKA DAWEGSGLVT VEQTLAYSTM DLLLGGKRGG SSSRLDGRPF TTIEMSLVRR LVEIILTDLE LSFQPLSPVR FGIDRIETNP RFATITRPGN AAILITLKLD MDGRGGGMQI LFPYATVEPI RDLLMQSFMG ERLGRDQVWE SHLATEIWQA DVDMEAVLHE VTLPLKRVLN LKVGDTLMFD RKPSDLITVR CGDWALTQGR IGRIDDAIAV QIARPLRQSR TTLQAYEISM QNRNDG
|
| |