| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3011 |
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| Symbol | |
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| ID | 5835396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 3358876 |
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| End bp | 3360402 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641368811 |
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| Product | phytoene desaturase |
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| Protein accession | YP_001640471 |
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| Protein GI | 163852428 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.194152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGACAC TGGCCGTCAA ACCGACTGTC ACGTCCGACT CCGATGCCCG GCCGCATGCG
GTCGTGATCG GGGCCGGCTT CGGCGGGCTG GCCGCGGCGG TTCGGCTCGG CGCCCGCGGC
TATCGCGTCA CCGTTCTGGA ACGGCTCGAC CAGCCCGGCG GCCGCGCCCG CGTCCACCGC
CAGGACGGCT TCACCTTCGA TGCGGGGCCC ACCATCGTCA CCGCGCCGTT CCTGTTCGAG
GAGCTGTGGC GGTTGTGCGG GCGGGAGATG CGCGAGGACG TGACTCTCGT GCCGATGCAG
CCATTCTACC GCATTCGCTT CGAGGATGGG CAGAGCTTCG CCTATAGCGG CGACCGCGCG
GCGATGCGGG CCGAGGTCGC CCGCTTCTCG CCCGACGACG TGTCCGGCTA CGAACGCTTC
ATGGCCCATA GCGAGGCGGT GTGCCGGATG GGCTTCGAGG AACTCGGCCA CGTCCCGTTC
GGCAGCCTCG GCTCGATGCT GCGGATCGCG CCCGATCTGC TGCGCTTGTC GGGCCACCGC
AGCGTCTACG ACGTGGTGTC CCGCTTCATC CGCGACGAGC GGCTGCGCAC CATCTTCAGC
TTCCATCCCC TGCTCATCGG CGGCAACCCG TTTCGCGCCA GCGGCATCTA CTGCCTGATC
GCCCATCTGG AGCGGCAATG GGGCGTCCAT TTCGCCATGG GCGGTACCGG ACGACTGGTG
GACGGGCTCT GCGGCTTGAT CCGGGGGCAG GGAGGCCGCG TCCGCTGCGG CGAGGACGTT
TCGCGCATCC GCGTCGAGGA TGCGCGGGCG ACGGGTGTGG TGCTGGCGGG CGGCGAGGTC
ATCCCCGCCG ACACCGTCGT CTCGAACGCC GATTCCGCCT TCACCTACGG CACGCTGCTC
GGCGGCCGGA CCCGGCGCTG GAGCGCGCGG CGCCTGGCGC GCGCCTCGTC CTCCATGGGG
CTGTTCGTCT GGTATTTCGG TACCCGGAAG AAGTACCCGG AGGTCGATCA CCACATGATC
CTGATGGGCC CGCGCTATCG CGGCCTGTTG CAGGACATCT TCGACCGCAA GCACTTGGCG
AACGATTTCA GCCTCTATCT CCACCGCCCG ACCGCGACCG ACCCGCTGCT CGCGCCGCCC
GGCTGCGACG CGTTCTACGT GCTCGCCCCG GTGCCGAACC TCGACGGCGG CCAGGATTGG
GCACAGCTTG CCGAGCCCTA CCGCCAGCGG ATCGCGCGCT TCCTCGAAGG CTCGGTGCTG
CCGGGGCTGT CCGACGCCCT CGTCACCTCG CGGGTGACGA CGCCGCAGGA CTTTTCCGAC
GACTTCCTGA GCTTCCGCGG CTCCGGGTTC GGGCTGGAGC CGGTGCTGAC GCAATCGGCG
TGGTTCCGTC CGCACAACCG CTCGGAAGAC GTGGCCAACC TCTTCCTCGT CGGCGCGGGG
ACGCATCCCG GCGCCGGTCT GCCGGGCGTG CTGTCCTCGG CGCGTGTCCT CGATTCCGTG
GTGCCGGATG CCCGTGTTTG CGCCTGA
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| Protein sequence | MLTLAVKPTV TSDSDARPHA VVIGAGFGGL AAAVRLGARG YRVTVLERLD QPGGRARVHR
QDGFTFDAGP TIVTAPFLFE ELWRLCGREM REDVTLVPMQ PFYRIRFEDG QSFAYSGDRA
AMRAEVARFS PDDVSGYERF MAHSEAVCRM GFEELGHVPF GSLGSMLRIA PDLLRLSGHR
SVYDVVSRFI RDERLRTIFS FHPLLIGGNP FRASGIYCLI AHLERQWGVH FAMGGTGRLV
DGLCGLIRGQ GGRVRCGEDV SRIRVEDARA TGVVLAGGEV IPADTVVSNA DSAFTYGTLL
GGRTRRWSAR RLARASSSMG LFVWYFGTRK KYPEVDHHMI LMGPRYRGLL QDIFDRKHLA
NDFSLYLHRP TATDPLLAPP GCDAFYVLAP VPNLDGGQDW AQLAEPYRQR IARFLEGSVL
PGLSDALVTS RVTTPQDFSD DFLSFRGSGF GLEPVLTQSA WFRPHNRSED VANLFLVGAG
THPGAGLPGV LSSARVLDSV VPDARVCA
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