Gene Mext_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2942 
SymbolmurC 
ID5833793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3287561 
End bp3288967 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content68% 
IMG OID641368742 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_001640402 
Protein GI163852359 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0822361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGC CCGAAAAGCT CGGCCCCATC CACTTCATCG GCATCGGCGG CATCGGCATG 
TCCGGCATCG CCGAGGTCAT GGCCAATCTC GGCTATACGG TGCAGGGCTC GGACGCGAAC
GACAACGCCA ATGTCCGGCG GCTGGCCGAG AACGGCATCC GCACCTTCGT CGGCCACCGG
GCCGAGAACG TCGAGAACGC GGCCCTCGTG GTGGTCTCCA CCGCGATCCG CCGCGACAAC
CCGGAGCTGA TCGAAGCCCG CGAGCGCCGC CTGCCGGTGG TGCGCCGCGC CGAGATGCTG
GCCGAGCTGA TGCGGTTCAA ATCCTGCGTC GCGGTGGCCG GCACCCACGG TAAGACCACG
ACGACCTCGC TCGTCGCCAC CCTGCTCGAT GCCGGCAACC TCGACCCCAC CGTCATCAAC
GGCGGCATCA TCAACGCCTA CGGCACCAAT GCCCGTATGG GTGCCGGCGA CTGGATGGTG
GTCGAGGCCG ACGAATCCGA CGGCACCTTC CTCAAGCTGC CGGCGGATGT CGCCATCGTC
ACCAACATTG ACCCCGAGCA TCTCGACCAT TTCGGCTCGT TCGAGGCGAT CAAGGACGCG
TTCCGGCGCT TCATCGACAA CATCCCGTTC TATGGCTTCG CCGTGATGTG CATCGATCAC
CCGATCGTGC AGGATCTGGT CGGCCATATC GAGGACCGGC GCATCATTAC CTACGGCGAG
AACCCGCAGG CCGACGTGCG CCTCATCGAC ATCGACCTGA AGGGCGGCCA GAGCCGCTTC
CGGGTGATGA TCCGCGACCG CCGCCCCGGC TTCCGCATGG AGATCGAGGA TCTCGTCCTG
CCGATGCCCG GCCGCCACAA CGCGCTCAAC GCCACGGCGG CTTTGGCGGT GGCCCACGAA
CTCGGCGTGC CGTCGGATGC GATCCGCAAG GCTTTGGCGG GCTTTGGCGG CGTTAAGCGC
CGCTTCACCC GCACGGGCGA GTGGAACGGC GCCACGATCT TCGACGATTA CGGCCACCAC
CCGGTGGAGA TCCAGGCGGT GCTGCGCGCG GCCCGCGCCT CGACCGACGG CCGGGTCATC
GCCATCGTGC AGCCCCACCG CTACACCCGG CTTCAGTCGC TGTTCGAGGA TTTCTGCACC
TGCTTCAACG ACGCCGACAC GGTGATCGTC GCCCCCGTCT ACGCGGCGGG CGAGGCGCCG
ATCGAAGGCA TCGACCGCGA TTCGCTGATT GCCGGCCTGA AGGCCCGCGG CCACCGCGAC
GCCGTCGCCC TTGAGCGCCC GGAGGATCTG GCCCGCCTCG TCGCCGGCCG CGCCGGTTCG
AACGACTACG TCGTGTGCCT CGGCGCCGGC ACGATCACCC AGTGGGCCTA TGCGCTGCCG
GGAGAGCTGG CGGCTTTGCA AGGATGA
 
Protein sequence
MKLPEKLGPI HFIGIGGIGM SGIAEVMANL GYTVQGSDAN DNANVRRLAE NGIRTFVGHR 
AENVENAALV VVSTAIRRDN PELIEARERR LPVVRRAEML AELMRFKSCV AVAGTHGKTT
TTSLVATLLD AGNLDPTVIN GGIINAYGTN ARMGAGDWMV VEADESDGTF LKLPADVAIV
TNIDPEHLDH FGSFEAIKDA FRRFIDNIPF YGFAVMCIDH PIVQDLVGHI EDRRIITYGE
NPQADVRLID IDLKGGQSRF RVMIRDRRPG FRMEIEDLVL PMPGRHNALN ATAALAVAHE
LGVPSDAIRK ALAGFGGVKR RFTRTGEWNG ATIFDDYGHH PVEIQAVLRA ARASTDGRVI
AIVQPHRYTR LQSLFEDFCT CFNDADTVIV APVYAAGEAP IEGIDRDSLI AGLKARGHRD
AVALERPEDL ARLVAGRAGS NDYVVCLGAG TITQWAYALP GELAALQG