| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2841 |
|---|
| Symbol | |
|---|
| ID | 5834698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3187037 |
|---|
| End bp | 3188770 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641368642 |
|---|
| Product | ATPase domain-containing protein |
|---|
| Protein accession | YP_001640302 |
|---|
| Protein GI | 163852259 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.274853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA GCGCATCGCC CTCCGGCGCA TCGTCCGCCC CACCCGGCCA CCGCCTGCTC
TTGGTCGAAG ATTCGGAGAC CCAGGCGCTC GAATTGCGGC TTCAGCTCGA AGGCCAGGGC
TTTTCGGTGC AGCGCTGCGC CACGGCCGAG GCCGCCCTCG ACCTGCTCAA CACCGACCTT
CCCGATCTCG TTGTCGCCGA CCACCACCTT CCCGGCATGA ACGGCGACGA GTTCACCCGG
CAGATGCGGC TCTCGCTGCG CACGCGGGCG CTGCCGGTGG TGATGCTTAC CAGCGCCCGC
AACGGCGAGC GCCACGGCTT CGAGAGCGGC GCCGACGCCT ATGTCGAGAA ATCGGCCGAT
CGCGACCTGC TGGTGCTGCG CATCCGCGCT CTCCTGCGCG AGCGCAAGAG CTCCGCGACG
GAGGGACCGT CCGGCGCCGC GTTCCGCCGC GGCCGGGTGC TGATCGTCGA TGGCAGCGCC
ACCTACCGCG CCTTCTTCAC CGGCCTGCTG ACCCAGGAAG GCCACACCGT CGTCGCCGCG
GCCGACCGCA CGGGGGCGCT CGCCGCCCTC GACGAGCCCG GGGCCGGCTT CGACTGCGTG
ACCCTCGACC TCGTCGGCAG CGCCTATGAC GGCATCGCGC TCTGCACCGA GATCGCCGAG
CGCCGCATGA AGGCGCCGGA GGGCGGCGGC AACGCCTTCC CCCTCGTCGG CATGGCCGGC
GACAAGCCGG ACAAGAGTCT TCTGGTCGCC GCCTTCGCTG CGGGCGCCGA CGATGTGGTC
TCGAAGGCCG ACGGCGAGGT GCTGGCGATG CGGGTGCGCG GCCTCGTTCG CCGCCGCCTG
CTCGAAGAGG ACAACCGCCG CATCTCCGGT GAGTTCGGCG ACCGCGAGCG GGCAGTCGAA
CGCGCCCGCG CCGAGGCCGA GGCGGCCGCC GCCCGCGCCG CCCTCGCCGA CGCCCTCGGA
CAGGCCAACC GCGATCTGGA GGACGCCAAC CGCAAGCTGA CGGAGGCGCA GGCCAAGCTG
GTTCAGGCGG CCAAGATGGC CTCGCTCGGC GAGCTGGTCG CCGGCATCGC CCACGAGATC
AACAACCCGC TCGCCTTCAT CCTCGCCCAC CAGGGCACGG TGGAACGCCT GCTCGGTGAT
TTGCCGCCGC CCGACGCGCC GGAGGGACAG CGGGCGCTGA TGAAGGCGCG CGACCGAGTT
GGCTCGATGC GTCTGGGCCT GACCCGAATC CAGGATCTCG TTCTCAATCT ACGGAAGTTC
TCGCGGCTCG ACGAGGGCGA GCGCGGCCTC GTCAACGTGC CGGAAGCGAT CGAGACGGTA
CTGGCGCTGA TCCAGCATAA GCTCGGCACC CGAATCACGG TGACCCGCGA CTTCTCGGGA
CGGGCCGAGA TTTCCTGCAC GCCCGCCCTG TTGAATCAGG TCGTCATGAA CATCCTCGGC
AATGCAGCGG ATGCAATCCA CGGCGACGGG ACGATCACGG TGGCGACCTA TTCGGATGCC
GAGACCGACA TGATCCGCAT CAGCGACACC GGGCCCGGTA TTCCCGAAGA ATTACGCGAA
AAGATCTTTG AGCCGTTCTT CACGACGAAG CCGGTCGGAT CGGGCACCGG GCTCGGCTTG
GCGATTGCCT ACAGCGTCGT TCAGGCGCAT AGCGGCTCGC TGATCGTCGA GACGGCGCCG
GGCGGCGGCG CGAGCTTCGT CATCGGAATT CCGAGGCAAC CGGCACCGGT ATGA
|
|---|
| Protein sequence | MTASASPSGA SSAPPGHRLL LVEDSETQAL ELRLQLEGQG FSVQRCATAE AALDLLNTDL
PDLVVADHHL PGMNGDEFTR QMRLSLRTRA LPVVMLTSAR NGERHGFESG ADAYVEKSAD
RDLLVLRIRA LLRERKSSAT EGPSGAAFRR GRVLIVDGSA TYRAFFTGLL TQEGHTVVAA
ADRTGALAAL DEPGAGFDCV TLDLVGSAYD GIALCTEIAE RRMKAPEGGG NAFPLVGMAG
DKPDKSLLVA AFAAGADDVV SKADGEVLAM RVRGLVRRRL LEEDNRRISG EFGDRERAVE
RARAEAEAAA ARAALADALG QANRDLEDAN RKLTEAQAKL VQAAKMASLG ELVAGIAHEI
NNPLAFILAH QGTVERLLGD LPPPDAPEGQ RALMKARDRV GSMRLGLTRI QDLVLNLRKF
SRLDEGERGL VNVPEAIETV LALIQHKLGT RITVTRDFSG RAEISCTPAL LNQVVMNILG
NAADAIHGDG TITVATYSDA ETDMIRISDT GPGIPEELRE KIFEPFFTTK PVGSGTGLGL
AIAYSVVQAH SGSLIVETAP GGGASFVIGI PRQPAPV
|
|---|
| |