Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2817 |
Symbol | |
ID | 5831920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3155069 |
End bp | 3156403 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641368618 |
Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_001640278 |
Protein GI | 163852235 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.288222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.315391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACC AAGCCGCGCG GCCGCCCGGG CAGGAGCCGG GGAATAAATC GGCGGCGGCG GTCGTGGTCG CGGCCGGCAA GGGGCTGCGT GTCGGCGGCG ACTTACCCAA GCAATACCGC CGCGTCGGCG GCCGGGCCGT CCTGACGCGG ACGCTTGCGG CGCTGGCGCA ATCGCCCCGC ATCACCCGCA TCCAGCCGGT GATCGCGCCG GATGCGCAGG ACTTCTATCG CGAATGCCTC GCCGATCTCG CGCCTGCCCA TCGTGAAAAG CTCGCCGAGC CGGTGCCGGG CGGGGCGACG CGCCAGCAAT CGGTGGCGGC CGGGCTCGAA GGGCTCGCCC GCTTAGGCGC GCCCGATCTC GTGCTCGTCC ACGACGCGGC GCGGCCCTTC GTGGACGAGG CGCTGATCGC CCGCGCGATC GCGGCCGGCT CCGAGCACGG CGCATCGGTG CCGGGCATCG CGGTCTCCGA CACGATCAAG CTCGTGGAGG AGATCGCGCC GGGCATCGGC CGCGTCCACG AGACCCCGGC GCGTGAAAAT CTCCGCGCGG TGCAGACGCC GCAGAGCTTC CGTTTCGGCC TGCTTCTCGA CGCGCATCGC CGAGCCGTCG CCGAGGGCCG CGACGGCTTC ACCGATGACG GGGCGCTCGC TGAATGGGCC GGGCTGCCGG TCGTGGTGTT CGAGGGCGAC GCCCGCAACC GCAAGATCAC TCAGGCTGCC GACCTGATCG AGGCCGACCG GGCATTCTCC GGACGGGCTT TCTCTGAACC TGCGGCCGCG ATATCGGATG ACACCATGAC CACTTACGTA ACCCGCCTCG GCACCGGCTT CGACGTCCAC GCCTTCACGG AGGGCGACCA TGTCTGGCTC GGCGGCGTGA AGATCCCCGC CGACCGCGGC GTGCTCGCCC ATTCCGACGG CGACGTGGCG CTGCACGCCC TCACCGACGC GCTGCTCGGC GCCATCGCCG ACGGCGACAT CGGCACGCAC TTCCCGCCCT CGGACGAGAA GTGGCGCGGC GCGGCCTCCG ATCAGTTCCT GGCCCATGCC TGCGAATTGG TGCGGGCGCG CGGCGGCAAG ATCGACCATC TCGACATCAC GGTGCTGGCG GAAGCCCCGC GCATCGGCCA GCACCGCGAG GCGATCCGCG CGCGTATCGC CGCGATCGCC GGCGTGCCGC TGTCCTCGGT GTCGATCAAG GCGACCACGA CCGAAAAGCT TGGCTTCGTC GGTCGCGCCG AGGGCCTCGC TGCCCAGGCC GCCGCGACGG TGCGGCTGCC GGAGGTCTGC GCGGAGCTGG AGACCGAGGC GGAGACCAAC GAGCGCCGTT CGTGA
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Protein sequence | MSDQAARPPG QEPGNKSAAA VVVAAGKGLR VGGDLPKQYR RVGGRAVLTR TLAALAQSPR ITRIQPVIAP DAQDFYRECL ADLAPAHREK LAEPVPGGAT RQQSVAAGLE GLARLGAPDL VLVHDAARPF VDEALIARAI AAGSEHGASV PGIAVSDTIK LVEEIAPGIG RVHETPAREN LRAVQTPQSF RFGLLLDAHR RAVAEGRDGF TDDGALAEWA GLPVVVFEGD ARNRKITQAA DLIEADRAFS GRAFSEPAAA ISDDTMTTYV TRLGTGFDVH AFTEGDHVWL GGVKIPADRG VLAHSDGDVA LHALTDALLG AIADGDIGTH FPPSDEKWRG AASDQFLAHA CELVRARGGK IDHLDITVLA EAPRIGQHRE AIRARIAAIA GVPLSSVSIK ATTTEKLGFV GRAEGLAAQA AATVRLPEVC AELETEAETN ERRS
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