Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2779 |
Symbol | |
ID | 5830975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3117742 |
End bp | 3119691 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641368581 |
Product | chloride channel core |
Protein accession | YP_001640241 |
Protein GI | 163852198 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.674097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTCT TCGCGGTTCG CACCATCGAT CCACCGATGC TAGACGGCGG GCGCATGGCC GCTATGGCCT GCGATCTGGA CCCAGCCTCC GCGAGTGCGA TGAGCCCGTC TCCGTCTCCG TCTCCGCCCA CCGCCGCCCC GCTCGTCCAG GCACCGGTGC GGCTTCGGGC CTGGGTGCGG GGGAACGAGA TCGCCCTGGT GGGGCTCGCG GCCGTCACAG GATGCGTCGG GGGGCTCGTC GTCGTCGCCA TGAGCGGCGC CAGCCAGTTC CTGCGCGAAA TCCTCTATCG GCTTCCCGCA GGCCAGCGCC TCAGCAGCCT GACGGATCTT CCGACCGACG GGCTGATGGG GGCCCCGTTC CTGGCTCCGG CGCTCGGCGG CGCGATCCTC GGCCTGCTGC TCCTGATCGC GACGAGGGGG CGCGGCAAGG CCAAGCGCGC AGTGGTCGAT CCGATCGAAG CCAATGCCCT GCACGGCGGG CGGATGTCGC TGCGCGGCTC GCTCGACGTG GCGGCACAGA ACGTGATCTC GAACGGCTGC GGCGCCTCGG TCGGGCTTGA GGCCGGCTAC ACCCAGGTCG CGTCGGGGAT CGCCTCGCGG CTCGGCATCG CCTTCGAGAT GCGGCGTTCG GACCTGCGCA CCTTGGTCGG CTGCGGCTCG GCAGCCGCCA TCGCCGCCGC GTTCGGCTCG CCGCTGACCG GCGCCTTCTA CGCGTTCGAA CTCATCATCG GCACCTACAC CATCGCGACG CTCGCTCCCG TCGTCGTCGC GGCGCTGTGC GGCAGCCTCG TGGCGCGGGC GCTCGCGCCC CAGCCCGCCT TGGTCGATGT CGGCGCTCTG GCGCTGGCCA AGAATACGAC TTTGGGGGCG GGCGACACGC TGCCCTGCCT CGCACTCGGC CTCGTCTGCG CCGGCCTCGC CGTGCTGCTG ATGCGGGGCG TAACGCTGGT GGAGCAAGGC TTTCGCGCCT CGCGCCTGCC CGCACCCCTG CGGCCCGTCC TCGGTGGCCT GTGCGTCGGC GGCCTCGCGC TCGGGACGAC CCCCCAGGTG CTCTCGGCCG GGCACGGCGC ACTCCACATC ACCCTCGCGC CCGAGGCGGC GGCCGGGCTC GGTGCGCTCG CCGGCCTCAT CGTCGCCAAG GCCGCAGCCT CCGCGATGTC GATCGGATCG GGCTTCCGCG GCGGCCTGTT CTTCGCCTCG TTGTTCCTCG GCGCGCTGGT CGGCCGCCTG TTCGCCGGGC TGGCGCCGAT GATCTGGCCC GGCTTCGACG GGTTCGGCCT CGCGCCGGTC GGCTATGCCG TGATCGGCAT GAGCGCGTTT GCCGTCGCCA TCGTCGGCGG CCCGCTCACC ATGACCTTTC TCGCCCTGGA GATGACGGGC AGCTTCCCCG TGACCGGGCT CGTGCTCGCC TCGGTGATCG CCTCCTCGCT CACGGTGCGG AAGACCTTCG GCTACTCCTT CGCCACGTGG CGCTTCCACC TGCGCGGCGA GAGCATCCGC AGCGCCCACG ATGTCGGCTG GATGCGCTCC CTGACGGTCG GGCGGATGAT GCGCAAGGAC ATCCGCCCGG TGCCCCTCGA CACGCCGATG GCAACATTCC TGCGCGCGCA TCCCCTCGGC TCGCCGTCGC GCGTGGTCGT GGTGGACGCG CACGATCGCT ATGCCGGGAT CGTCCTCGTG CCGGAGGCCC ATGCGCGTGC GGCCGAGAAT GGTGGCGAGA CGCCGCACCT CGCCGACGTC GTGCGTTACC CGGGGTCGTT TCTGCTCGCC GACATGACCG TCAAGCAGGC GGCGGAAGCG TTCGATGAGG CCGAGAGCGA GGAACTCGCC GTACTCAGCG ATCGGCAGAG CCGCCGCGTG ATCGGATTGC TGACCGAAAG CCACACACTG AAGCGCTACA GCGAAGAGCT GGACCGGCAA CGACGCGCCA TGCTCGGCGA AGCGGCCTGA
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Protein sequence | MRLFAVRTID PPMLDGGRMA AMACDLDPAS ASAMSPSPSP SPPTAAPLVQ APVRLRAWVR GNEIALVGLA AVTGCVGGLV VVAMSGASQF LREILYRLPA GQRLSSLTDL PTDGLMGAPF LAPALGGAIL GLLLLIATRG RGKAKRAVVD PIEANALHGG RMSLRGSLDV AAQNVISNGC GASVGLEAGY TQVASGIASR LGIAFEMRRS DLRTLVGCGS AAAIAAAFGS PLTGAFYAFE LIIGTYTIAT LAPVVVAALC GSLVARALAP QPALVDVGAL ALAKNTTLGA GDTLPCLALG LVCAGLAVLL MRGVTLVEQG FRASRLPAPL RPVLGGLCVG GLALGTTPQV LSAGHGALHI TLAPEAAAGL GALAGLIVAK AAASAMSIGS GFRGGLFFAS LFLGALVGRL FAGLAPMIWP GFDGFGLAPV GYAVIGMSAF AVAIVGGPLT MTFLALEMTG SFPVTGLVLA SVIASSLTVR KTFGYSFATW RFHLRGESIR SAHDVGWMRS LTVGRMMRKD IRPVPLDTPM ATFLRAHPLG SPSRVVVVDA HDRYAGIVLV PEAHARAAEN GGETPHLADV VRYPGSFLLA DMTVKQAAEA FDEAESEELA VLSDRQSRRV IGLLTESHTL KRYSEELDRQ RRAMLGEAA
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