| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2765 |
|---|
| Symbol | |
|---|
| ID | 5833261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3097871 |
|---|
| End bp | 3099856 |
|---|
| Gene Length | 1986 bp |
|---|
| Protein Length | 661 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641368566 |
|---|
| Product | surface antigen (D15) |
|---|
| Protein accession | YP_001640227 |
|---|
| Protein GI | 163852184 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0729] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTCC GGATGAACTG CCTGCTGCGT TCGCCGGTCT TTGGTGGCGT TCTTCTGGGT
GTCGCGACGC TGGTCCTTCT GCCGCGTCCG GCGGCCGCCT TCGACCTGTT CGGCTTGTTC
GGCTCGGAAG AGGAGCCGCC GGCCCCGAGC GCGACGGCAC TGCCCTATAG CCTGCGCTTC
ACCGGCACCG ACGATTCGGA CATCCTTCGG GCCCTGCAGG ATACCTCGAC CCTCTACCGC
CTGCGCCAGG AGGCGCCGCC GGACGGCGAG GGGCTGGTGC GGCGCGCCGA GGCCGATCTG
CGCCGCCTGA CCGATGTGCT CTCCGGTTAC GGCTACTATC AAGGCACCGT TTCGATCCGC
ATCGACGGAG TGCCGGTCGG CGGCGAGGCC TCGCTGGTTG CCGCCGCACG TGTCGCCGAG
AACGCGCGCG CGCGCACGCT GGTGCCGGTC AAGATCGCGG TCGATATCGG TCCCGCCTAC
ACCCTGCGCA CCGTCACCGT CCTCGACCCC CGCGGCCGTC CGTTCTCGGA GGAGGTGCTG
CCCGAGCGCT TCACCCGGAC CGGCGACGAC GTTCCGACCC GCTCGGCGAC CGTGCTCGCC
CGCGAGGCGA AGATCGTCGA TCGCTTCCGC GCCCTCGGCC ACCCCTTCGC CAAGGCCGTG
ACGCGCGATC CCGTCGTCGA CGATGCGGCG CACGTCATGG ACGTGACCTT CACCATTGAT
CCCGGACCGA TGGCGGGCCT CGGCGAGGTG TCGGTGAAGG CGACCGACGG CATCGACCCG
GCGGTGATCC GCTCGTTCAT CTATTCCGAG CCCGGCGATC CCTACTCGCC GAAGGCGGTC
TCCGACATCC GTCGCTCGGT CGCCCGCATC GAGGGCCTCG GCGCGGTCCG CGTGCGCGAG
GGCGAGAGCC TCGATGCGCA GGGCAACCTG CCGATCTTCG TCGAGGTGAG CGAGCGCGAG
CGCAACCTCA TCGGCGTCTC GGCGCGCTAC TCCACCGTCG ATGGGCCGGG CGTGCGCGCC
TACTATGCCA ACCGCAACCT CTGGGGCGGC GGCGAGACGC TGCGGCTCGA CGCCGACATC
TACTATCTCG GCCTCGGCTA CGATCCGTTC GCGACCCAGC GCAAGCTTGC CGGCATCGAC
ACGACCGGCC TCGGCGGGCG CCTTTCGGCG ACCTTCGTGA AGCCGGCGCT CGGCGGCACC
CGCAACGACC TGCTGGCGAA CCTCTTCGTG ACCCGCGAGG TGCAGCAGAG CTACTTCGTG
GATGCGGCCG GGGCCTCGGT CGCGGTCCGC CACCGCTTCT CCGACACGTT CTCGGCCCAG
ATCGGCCTCG ACGGACAGGT CGGCCGCTCG AAGGATGCTA TCGGCACCGT CGATTACCGG
CTGATCGGCG TGCCGCTCTC GGTGACCTAC GACTCGACCG ACAGCCTGCT CGACCCCACC
GAGGGTTTCC GGGTGATCGC CTCGGCCGCG CCCTATCCCG GCTTCCTCGG CTCGGATCCG
GGCATCTTCG TCGCGAAGGC CCAGGGCTCG ACCTACTACG CGCTCGATGA CGAGGCGAAA
TACGTGCTCG CCGGGCGCGT CGGCTTCGGC TCGGTCTCGG GCGCCCGGCT CGACGAGATC
CCCGACAATT TCCGCTTCTT CGCCGGTGGC GGCGGATCAG TCCGCGGCTT TGCCTTCCGC
ACGCTGGGCC CCCGAGGACC GTTCAATCTG CCGATCGGCG GGCGTAGCCT GCTGGAGGCC
TCGATCGAGG CCCGCATCAA GATCACCGAC ACGATCGGCA TCGTGCCCTT CTTCGACGCG
GGCACGGCCT TCGCCTCGAC GCTGCCGGAT TTCGATGAGC GTATCCGCAA GGCGGCGGGC
ATCGGCCTGC GCTACTACAC CGGCATCGGT CCGATCCGCG CCGACCTCGC TTTCCCGCTC
GACCGGATCA AGGGAAACCG CGAGCTGCCG GCCGCCCTGT ATATCAGCCT CGGACAGGCG
TTCTGA
|
|---|
| Protein sequence | MHVRMNCLLR SPVFGGVLLG VATLVLLPRP AAAFDLFGLF GSEEEPPAPS ATALPYSLRF
TGTDDSDILR ALQDTSTLYR LRQEAPPDGE GLVRRAEADL RRLTDVLSGY GYYQGTVSIR
IDGVPVGGEA SLVAAARVAE NARARTLVPV KIAVDIGPAY TLRTVTVLDP RGRPFSEEVL
PERFTRTGDD VPTRSATVLA REAKIVDRFR ALGHPFAKAV TRDPVVDDAA HVMDVTFTID
PGPMAGLGEV SVKATDGIDP AVIRSFIYSE PGDPYSPKAV SDIRRSVARI EGLGAVRVRE
GESLDAQGNL PIFVEVSERE RNLIGVSARY STVDGPGVRA YYANRNLWGG GETLRLDADI
YYLGLGYDPF ATQRKLAGID TTGLGGRLSA TFVKPALGGT RNDLLANLFV TREVQQSYFV
DAAGASVAVR HRFSDTFSAQ IGLDGQVGRS KDAIGTVDYR LIGVPLSVTY DSTDSLLDPT
EGFRVIASAA PYPGFLGSDP GIFVAKAQGS TYYALDDEAK YVLAGRVGFG SVSGARLDEI
PDNFRFFAGG GGSVRGFAFR TLGPRGPFNL PIGGRSLLEA SIEARIKITD TIGIVPFFDA
GTAFASTLPD FDERIRKAAG IGLRYYTGIG PIRADLAFPL DRIKGNRELP AALYISLGQA
F
|
|---|
| |