| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2708 |
|---|
| Symbol | |
|---|
| ID | 5833105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3027658 |
|---|
| End bp | 3028344 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641368508 |
|---|
| Product | regulatory protein TetR |
|---|
| Protein accession | YP_001640170 |
|---|
| Protein GI | 163852127 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.855326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.333826 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTGTT TCATCGGTTG CAACCGCACG CATTCGGTTT GCACGAAGGA GGGTGAACGG
GTGCGACCCT GGCGCGAGGG ACCGGGCGAC CGGCGCAGCT ACCATCACGG CAACCTCAAA
GAGGCGTTGA TCGAGGCCGC GCGCCGCTTC ATCGCCGAGC GGGGCATCGG TGGCTTCACG
CTGGTCGATG CCGCCCGCTT GGTCGGGGTG ACGCCCGCGG CGCTCTATCG CCATTTCCGC
GGGCGCGAGG CCCTGTTGGA GGAAGTGGCG GGCCGCGGCT TTGCCGACTT GGCCGACCGG
CTGGCCCGGG CGCTGGCGGG CCGTGGCACG CCGCTGGAGC GGTTCACCCG CATGGGTGAA
GCCTATCTCG CCTTCGCCGA GGAAGAGCCG GGCTACTACG CGGCGATCTT CGAAGTGCGC
GGTCAGGCAG CCCCGGCGCC CGCCCCTGAG CGGCCGAATC CATTCGATCT TCTGGTCGAA
GCTCTCCGCA CGACCTTCCC CGACGGTTTC GACGGTGTCG ACCCGCGCTT CCTCGCACTT
GAGGTCTGGG CGCTCTCGCA CGGGATCGCC ACGCTATCGG CTGCCGGCCA GCTGCCGAAG
CCCGGGCCGG ACAAGTACGA ATTGCTACGC GCGGGCGTTC TCGCGCTGGT CCACGGCGCC
GGTGGGCGGG CGAAGGACAG AGGTTAG
|
|---|
| Protein sequence | MRCFIGCNRT HSVCTKEGER VRPWREGPGD RRSYHHGNLK EALIEAARRF IAERGIGGFT
LVDAARLVGV TPAALYRHFR GREALLEEVA GRGFADLADR LARALAGRGT PLERFTRMGE
AYLAFAEEEP GYYAAIFEVR GQAAPAPAPE RPNPFDLLVE ALRTTFPDGF DGVDPRFLAL
EVWALSHGIA TLSAAGQLPK PGPDKYELLR AGVLALVHGA GGRAKDRG
|
|---|
| |