| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2707 |
|---|
| Symbol | |
|---|
| ID | 5833104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 3026275 |
|---|
| End bp | 3027492 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641368507 |
|---|
| Product | cobalamin synthesis protein P47K |
|---|
| Protein accession | YP_001640169 |
|---|
| Protein GI | 163852126 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.217107 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGC TCCCCTCTCG CCTCCCCGTC ACCGTGCTGT CGGGCTTCCT CGGTGCCGGG
AAGACGACTT TGCTCAATCA CGTGCTCAAC AATCGCGAGG GTCGGCGCGT CGCGGTGATC
GTCAACGATA TGAGCGAGGT GAACATCGAC GCCGACCTCG TCCGCGACGG TGGGGCGGAT
CTGTCGCGCA CGGACGAGCG GCTCGTGGAG ATGACCAACG GCTGCATCTG CTGCACCCTG
CGCGATGACC TTCTGGCCGA GGTTCGCCGC CTCGCCGCCG AGGGCCGCTT CGACTACCTG
TTGATCGAGG GTACGGGCAT CGCCGAGCCG CTGCCGGTGG CGAGCACCTT CTCCTTCCGC
GACGAGGCCG GCGAAGCGCT CAGCGACATG GCGCGGCTCG ACACGATGGT GACCGTGGTC
GATGCGGTGA ACCTGCTGAA GGATTACGGC TCGAACGACT TCCTGCGCCA GCGCGGCGAG
ACCGCAGGCG CCGACGACAC CCGCACCCTG GTCGATCTGC TGGTGGAGCA GATCGAGTTT
GCCGACGTCG TCGTGATCAA CAAGGCGCGC GACGTCTCGC CGGATCACCT CGACCTCGTG
CGCTCGGTGG TGCGGGAGCT CAACGCGGAT GCGCGCATCG TCGAGGCATC CCACGGCCAA
GTGCCGCCGG ACGCCATCCT CGATACCGGG TTGTTCGACG AGGAAAAGGC GCAGGAGCAC
CCGCTCTGGT TCAAGGAACT CTACGGCGCG CACGAGCATG TGCCGGAGAC CGAGGAATAC
GGCATCAGTT CCTTCGTCTA CCGGGCGCGC CGGCCGCTGG ATCCGCAGAA ATTCCAGGCT
TTCGCCAACA CGACCTGGCC GGGGCTGATC CGGGCGAAGG GCCATTTCTG GCTCGCGACT
CGGCCGGAAT GGGTCGGCGA ATTTTCACTG GCCGGTGCCG TCGCGCATAT CGGCGCGATG
GGGTTCTGGT GGGCGGCGGT GCCGCGCCAG CGCTGGCCGG AGGAAGAGGT TTTCCGCGAG
CGCCTTCATA CGGTCTGGAG CGAGGTTTGG GGTGACCGCC GCCAGGAACT CGTCTTCATC
GGCCGCGGCA TGGACCGGGA CGCGATCACC GACGCGCTCG ATGCCTGCCT CGTCGGTCCG
GCGGAGGTTC GGCGCTTCGA TGCGGAGGCC TATCGCGACC TGCCCGATCC GTTCCCGGCC
TGGCGCCAGG CCGCCTGA
|
|---|
| Protein sequence | MSELPSRLPV TVLSGFLGAG KTTLLNHVLN NREGRRVAVI VNDMSEVNID ADLVRDGGAD
LSRTDERLVE MTNGCICCTL RDDLLAEVRR LAAEGRFDYL LIEGTGIAEP LPVASTFSFR
DEAGEALSDM ARLDTMVTVV DAVNLLKDYG SNDFLRQRGE TAGADDTRTL VDLLVEQIEF
ADVVVINKAR DVSPDHLDLV RSVVRELNAD ARIVEASHGQ VPPDAILDTG LFDEEKAQEH
PLWFKELYGA HEHVPETEEY GISSFVYRAR RPLDPQKFQA FANTTWPGLI RAKGHFWLAT
RPEWVGEFSL AGAVAHIGAM GFWWAAVPRQ RWPEEEVFRE RLHTVWSEVW GDRRQELVFI
GRGMDRDAIT DALDACLVGP AEVRRFDAEA YRDLPDPFPA WRQAA
|
|---|
| |