| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2686 |
|---|
| Symbol | |
|---|
| ID | 5834218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3002755 |
|---|
| End bp | 3003516 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641368486 |
|---|
| Product | LmbE family protein |
|---|
| Protein accession | YP_001640148 |
|---|
| Protein GI | 163852105 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.218362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCGTA CCGCGCTCGC CATCTCGCCG CATCTCGACG ATGCGGTTTT CTCGGCCGGC
GGCACGCTGG CGCGGCTTGC CGCGCAGGGC TGGCAGGTCG TCATGGCGAC GATCTTCACG
GCATCGGTGC GGGACCCGCG CGGCTTCGCC CTCGCGTGCC AGCTCGATAA GGGGCTGGGG
CCGGAGGTCG ATTACATGGC CCTGCGCCGC GAGGAGGATC GCGCGGCGGC CCGTGCGCTC
GGCATCGAAG AGCCGGTCCA CCTGCCGTTC CGGGAGGCGC CGCATCGCGG CTACGCATCG
GCGCCGGAAT TGTTCGCCGA ACTTCGCCCC GACGACCGGA TCGGCGCCAA CCTCGCCGAC
GCCTTCGAAC GACTGGTGGC TGATACCGGG CCGGACCTGA TCCTCGCGCC GCAGGCCGTC
GGCGGCCATG TCGATCACGT GCAGGTCGTG CGCGCCTTCC GCGCCGCGCA GCCGCCCCTG
CCGGTGCTGT GGTGGCGCGA CTTCCCCTAC ACGGTGCGCA CCACCGAGCC GAAAGAGCCG
CTGAGGTCGA TCTTCGAGCA TTGGCCCGAG CAGGTCGTGC ACCTCGATTC GGAGGCCGAA
CACCGCAAAG CGGAAGCCTG CGGCGCCTAC GCGTCGCAGA TCAGCTTCCA GTTCGGCGGG
CCGGAGGGAT TGCGCACGCG TCTTTCCGCG GAGAACGGCG TCGAACGCTT CCGCTTGCAG
GGCCGGGTGC CGCCGGATCT GCGCGATGCC GGCTTCGCCT GA
|
|---|
| Protein sequence | MTRTALAISP HLDDAVFSAG GTLARLAAQG WQVVMATIFT ASVRDPRGFA LACQLDKGLG
PEVDYMALRR EEDRAAARAL GIEEPVHLPF REAPHRGYAS APELFAELRP DDRIGANLAD
AFERLVADTG PDLILAPQAV GGHVDHVQVV RAFRAAQPPL PVLWWRDFPY TVRTTEPKEP
LRSIFEHWPE QVVHLDSEAE HRKAEACGAY ASQISFQFGG PEGLRTRLSA ENGVERFRLQ
GRVPPDLRDA GFA
|
|---|
| |