| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2567 |
|---|
| Symbol | |
|---|
| ID | 5831613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2883327 |
|---|
| End bp | 2885039 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641368368 |
|---|
| Product | heparinase II/III family protein |
|---|
| Protein accession | YP_001640032 |
|---|
| Protein GI | 163851989 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.974647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGCAGGG GCCCCGAACG CTTGCAGCTC TACCGCCTGC TCGGTCACGA GATCGTCCGC
GCGGTTCGCG AACGGACGGC ACAGCTCACG GCGCGGCCCG AGATCCTCAC CCGCGCGCGG
GTGACCGGCC TCGTGATCGC GCCGCACGAC CTGCGGACCA GCGACGCCTC GCTCGCCGAC
GACATCTATT CCGGCCTGTT CGTCTTCGCC GGCCGCTCGC TGGTGGTGAG CGGACGCTCG
CCCTTCGACT ACGATCCCCC CTCGCCCGAA TGGGCGGACG CGCTCTACGG CTTCGGCTGG
CTGCGCCACC TGCGCGCCGC CGACACGGCT CTGGCCCGGG CCAATGCCCG CGCCTTCGTC
TCGGACTTCA TGAGCGGACG CGGCGAGGCG GCCCGCGCCA GCCCGGTGCC GGTCGCCTCA
CGCCGGCTGA TCTCGTTCCT GTGCCAGTCG CCGCTGGTGC TGGAGGGCGC CGACCACGCC
TTCTATCAGG CCTTCCTCAA AGCCGTCGGC AAGGGCGCGC GGGAACTGGA ACGCTCGCTG
CGGCGCTCGT CACCGCCGCA ATCGCGCCTG CTGGCAGCGG TGGCGCTGAC CTATGCCGGG
CTGTGCTGTG AGGGCATCGA GCCGATCCTG CGCCGGGCCA CCCGCATCCT CGTGCGCGAA
CTCGACGCGC AGATCCTGCC GGATGGCGGC CACCGATCCC GCGATCCGCG CTTCGCCATG
GAGCTGCTGC TCGATCTGCT GCCCCTGCGC CAGAGCTTTC TCAGCCGCAG CGTCGATCCG
CCGGAAGCGC TCCTGCGCGC CGTCGACCGG ATGCTGCCGG CGCTGCGCCT TCTGCGCCAC
GGCGATGCCT CGCTCAGCCA CTTCAACGGC ATGGGCGTGA CGGCGGCCGA CCATCTCGCC
ACGCTGCTGG TCTATGACGG GGCCGGCACC GAGCCGCTGA TGTACGCTTC CCATTCCGGC
TACGCCCGGC TCGAACTGGG GCGGGTCGTG CTCGTCTGCG ATGTCGGCGC GCCGCCGCCG
ATGGACCAGT CGCGTGAGGC CGCCGCCGGC TGCCTCTCCT TCGAACTCAC GAGCGGGGCG
CAGCGCATCG TCGTCAATTG CGGCAGTCCC GCGAGCGGCG GTGAGCTGCG CCGGGCCGCG
CGGAGCACCG CCGCACACTC GACGGCGACA GTCGCCGACA CCTCTTCCTG CCGCTTCCTC
GACGAGCCGG AGGATTGGTG GATCAGCCGG ATCGCCGCCC GCTGGCTGCT CTACCGCCGC
GGCCCCGTGG TCCTGCGCGG TCCCGGTCCG GTCGCGGTCG AGCGGCGCAC GGAGAACGGG
GCCGCGGTCC TGGCCGCGCG CCACGACGGC TACGTCACCG AATTCGGCAT CCTGCATGAG
CGCCGCTGGC GCCTTTCCGA CAGCCCTGTG CGGCTGGCGG GCGAGGACGC GTTCCGGCGC
GACAGCAAGC GCCCGCGCTC GCGGCCCCAG CCGGTGGCGG TGCGCTTCCA TCTCCACACC
GCCGTCGCGA CGCAGCCTCA GGACGACGGC AGCGTGATGC TGGGCCTGCC GACCGGCGAA
CGATGGCGCT TCACGGTGGA GGGGGCGACG GCGGCGATCG AGGAGAGCGT CTATTTCGCG
GGCGTCGTCG GAGCGCGGCG GACCGCGCAG ATCGTCCTGC ACCTGACGGT GGACGAGGAC
GCGCTGGTGC GCTGGCAGAT CGAACAGGTC TGA
|
|---|
| Protein sequence | MGRGPERLQL YRLLGHEIVR AVRERTAQLT ARPEILTRAR VTGLVIAPHD LRTSDASLAD
DIYSGLFVFA GRSLVVSGRS PFDYDPPSPE WADALYGFGW LRHLRAADTA LARANARAFV
SDFMSGRGEA ARASPVPVAS RRLISFLCQS PLVLEGADHA FYQAFLKAVG KGARELERSL
RRSSPPQSRL LAAVALTYAG LCCEGIEPIL RRATRILVRE LDAQILPDGG HRSRDPRFAM
ELLLDLLPLR QSFLSRSVDP PEALLRAVDR MLPALRLLRH GDASLSHFNG MGVTAADHLA
TLLVYDGAGT EPLMYASHSG YARLELGRVV LVCDVGAPPP MDQSREAAAG CLSFELTSGA
QRIVVNCGSP ASGGELRRAA RSTAAHSTAT VADTSSCRFL DEPEDWWISR IAARWLLYRR
GPVVLRGPGP VAVERRTENG AAVLAARHDG YVTEFGILHE RRWRLSDSPV RLAGEDAFRR
DSKRPRSRPQ PVAVRFHLHT AVATQPQDDG SVMLGLPTGE RWRFTVEGAT AAIEESVYFA
GVVGARRTAQ IVLHLTVDED ALVRWQIEQV
|
|---|
| |