| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2423 |
|---|
| Symbol | |
|---|
| ID | 5833019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2729223 |
|---|
| End bp | 2730836 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641368224 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_001639889 |
|---|
| Protein GI | 163851846 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.848309 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTGC GCGGTGTTCT CGACCATGTT TCCCACGGGC GGATCACCGG CTGGGCATGG
GACAGCGACC AGCCCGACAG TCCCGTCAGT GTCGTGCTCT CGGCCAATGA TCAGGTTCTC
GGACGCGTCC TAGCCAACCG CTACCGCCCC GACCTCGAGA AGGCCGGCAT TGGCAAAGGC
AAGCACGGCT TTGAGCTTTG GCTGCCCACA CCGCTGTCCG TTTTGCAGCG TCATGCCATC
AGTGCGCGCA TCGAGGGACC GGGAACCCAT ATCAAGCGCT CTCCACGCAT ACTGGAGGCC
TCGACTGCCT TCGACCGCTC AACCCGAGAA ACAATCGACC AACTCCTATC AGCCGTCGCG
GACGAAGCGG ATTTCGTCCG CCGCCTCGCT TTCCTAACCG ATCAGGCGGA TCGCCTGCGC
CAGCGCTATG CTAATTACAG CAGTGGCGCT GAGGAGCGGC AGAGACGGCA GCGTCTCGGG
TGGCAGGAGC AGAGCGCCAA ACCCGAGGGT ATGCCGCCGG CTCCTCCGAA GCCGCGCGCA
CTCGTCATCG ATGAAGGCAT GCCGTTGGGT GGGCACGATG CTGGTTCCAA CGCCGTCCTC
TCACATATGC GCAGCCTGCA GCGGCTCGGC TACGCGGTGA GCTTCGCACC ATCCAACCTG
CGCGGTGACA GCAGGCTGCT CGAAGAGGAA GGCATCACCT GCTGCGTCCA TCCTTGGTAC
GCCACGATCG AGGAGGTGCT GAGGCGACAG CGCAACGGTT TCGAGGTCGT CTACATGCAT
CGAGGGGCGA CAGCTTCCCG TTACGTGGCG CTCGCGCGGG ATCATCAGAA GCGCGCGAGA
CTCTTGTATA GCGTCGCCGA CCTTCACCAT CTGCGGCTCT CTCGACAAGC CGATATCGAG
GGGCGGCCGG AACTCCTTTC ATACAGCGAA CACGTTCGGA TCAAGGAATT GTCCGCGGCT
TGGCAGGCTG ACGCGATCAT CACGCATTCC AGCGTCGAGG CCGAGATCCT GCGCAGACAT
ATGCCGGCGG AGAAAGTCCA TGTCGTTCCT TGGAGCCTGA TACCCAATCC CACGACCGTT
CCTTTTTCAG AGCGACGCGG ACTGGCCTTC ATCGGCGGCT ATGGCCACAG GCCGAATGTG
GATGCAGCGC TCTGGCTGGT CGATACTGTC ATGCCTGAGA TCGATGCCCT TGGCGGCACG
CTGCCCTGCC TGCTGGTGGG CAGCAACATG CCCAATCAGC TGCGCAGCCT TCAGCGACAC
GATGTCGAGC CTGTAGGCCA CGTCGAACAT CTTTCTGCGG TTTTCGATCG TGTCCGCCTC
ACGGTGGCGC CGCTTTCCTT CGGCGCGGGC GTGAAGGGCA AGGTGCTGGA CAGCTTGGCG
GCCGGCGTCC CTTGCGTCTG CACCCCCGCG GCTGCGGAGG GCATGGATTT GCCCCAGGCA
TTGCTTGATC TCGTTGCGGC AACGCCGGTC GACCTCGCTC GCTCAATCCG TGCGCTTCAC
AACGATGAAG CTCTGAACCG CACCTGCAGC GAGGCTGGTC TCGCCTACAT CGCAGACCGC
ACGAGCGAGA CGCGCGTTGA TGCCCTTCTG TCGGCAGCTA TCGGGCGCCG TTAA
|
|---|
| Protein sequence | MPLRGVLDHV SHGRITGWAW DSDQPDSPVS VVLSANDQVL GRVLANRYRP DLEKAGIGKG
KHGFELWLPT PLSVLQRHAI SARIEGPGTH IKRSPRILEA STAFDRSTRE TIDQLLSAVA
DEADFVRRLA FLTDQADRLR QRYANYSSGA EERQRRQRLG WQEQSAKPEG MPPAPPKPRA
LVIDEGMPLG GHDAGSNAVL SHMRSLQRLG YAVSFAPSNL RGDSRLLEEE GITCCVHPWY
ATIEEVLRRQ RNGFEVVYMH RGATASRYVA LARDHQKRAR LLYSVADLHH LRLSRQADIE
GRPELLSYSE HVRIKELSAA WQADAIITHS SVEAEILRRH MPAEKVHVVP WSLIPNPTTV
PFSERRGLAF IGGYGHRPNV DAALWLVDTV MPEIDALGGT LPCLLVGSNM PNQLRSLQRH
DVEPVGHVEH LSAVFDRVRL TVAPLSFGAG VKGKVLDSLA AGVPCVCTPA AAEGMDLPQA
LLDLVAATPV DLARSIRALH NDEALNRTCS EAGLAYIADR TSETRVDALL SAAIGRR
|
|---|
| |