Gene Mext_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2298 
Symbol 
ID5834597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2547582 
End bp2548292 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content73% 
IMG OID641368097 
Productribose 5-phosphate isomerase 
Protein accessionYP_001639764 
Protein GI163851721 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00166171 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00629248 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGCGC CGGATCTGAA GCGGGCCGCG GCCGAGCGCG CGATCCCCCT GGTCGAGGAC 
GGGATGCGCC TCGGCATCGG CACGGGCAGC ACGGCCGCGG CCTTCATCAA GCTGCTGGGC
GAGCGCGTGC GCGCCGGGCT CAAAGTGACC GGCGTGCCGA CCTCGGAGGC GACCCGCATC
GCCTGCGAGC GCGAGGGCAT CCCGCTCGCC ACCCTCGAAG ACCTGCCCGA ACTCGATCTC
ACCATCGACG GGGCCGACGA GGTCGATGGA AGCCTGCGCC TCATCAAGGG CGGCGGTGCC
GCCCTGCTGC GCGAGAAGAT CGTCGCGGTC GCGAGCCGCC GCATGGTCGT GATTGCCGAC
GCCTCCAAGC ACGTCGAGAC CCTGGGCGCC TTTCCGCTGC CGGTGGAAGT GAACCTGTTC
GGCATCGGCG CCACCACCCG CGCCGTCGAG GCGGCGGTGG CGCGGGCCGG CTGCACGGGC
GAGACCGTGC GCCGCCACGA CGCCTCCGGT GCCCCCCTCC TCACCGATGG CGGCCACGCC
ATCCTCGATC TGCGGCTCGG CCGCATTCCC GATCCGGAGG CTTTGTCCGC CGGGCTCTGG
GCGGTGCCCG GCGTGGTCGA GCACGGCCTG TTTCTCGGCA TCGCCGACGC GGCCATCCTC
GCCGCGGCCG AAGGCGATGC GGCCGTCGTC AGCGTTCTCG GCCGCCTCTA A
 
Protein sequence
MSAPDLKRAA AERAIPLVED GMRLGIGTGS TAAAFIKLLG ERVRAGLKVT GVPTSEATRI 
ACEREGIPLA TLEDLPELDL TIDGADEVDG SLRLIKGGGA ALLREKIVAV ASRRMVVIAD
ASKHVETLGA FPLPVEVNLF GIGATTRAVE AAVARAGCTG ETVRRHDASG APLLTDGGHA
ILDLRLGRIP DPEALSAGLW AVPGVVEHGL FLGIADAAIL AAAEGDAAVV SVLGRL