Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2291 |
Symbol | |
ID | 5830928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2540568 |
End bp | 2542523 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641368090 |
Product | diguanylate cyclase |
Protein accession | YP_001639757 |
Protein GI | 163851714 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.140751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATGA AATTCATTTA CGGCCGCCGA GAGCTCCTGA GCGGTATCGT ACCGAGCTAT ACCGACCCGG AAGCCTGCAT CCGTCAGATC GGGGAGTTGC AAAAGCAGAT CCCGTCGCTC TACGCGCTGC TCTCCGTCAA CGCCTGCGCC CTCGCATTCA CCCATTACCC TCTTGCGCCG GCTTGGCTGA CCGTCGGGCT GCCCGGCGCG ATGATCGGCC TGTGTGTGGT GCGGGCCACG CATTGGTGGC ATCTCCGGCC GCAGTCGATC TCCGGAGAAG AGGCCGTCAA ACGGCTGCGC GGCACCAGCC TCCTCACCGT CCTGTTCTCG GCCCTCTTCG TCGGCTGGGC GATGAAGCTC ACGTCCTATG GCGGACCGTT CGAGCAGGGT CACGTCGCCA TCTTCGTCGC GATCACCGTC ATCGCCTGCA TCTTCTGCCT GACGCATCTG CCGGCGGCGG CGCTCGTCGT GACGATCATC GTCATGGGCA GCTTCCTGAT TCACTGCTTC ACGAGCGGCA ACAGCGTCTT CATCGCGATC GCGCTCAACA CCGCCTTCGT CACGGTGGTG ATGGTGCGCA TCCTCACCAA CAACTTCCTG GCCTTCCTCC AACTGCTCGA GTCCAAGGCT GAAGCCCAGC GGCTCGGCGA GGAGAATCAG CGCCTGGCGC ATACCGACAG CCTGACCGGG TTGCCCAATC GGCGCTATTT CTTCCAGCGC CTCGATGCGC TGATCGCCGC CTCGGCGACC GGAAACGCCG CCTTCGCCCT CGCGATCTTC GACCTCGACC GGTTCAAGCC GATCAACGAC ACGTTCGGCC ACACCGCCGG AGACCGGGTG CTGGAAGAGA CCGGGCGCCG TCTCAGCGCC TTCGCCGCGG ACGGCGTGAC GATCGCGCGC CTCGGCGGCG ACGAGTTCGG CGTGCTGATC CACGCGGCCG ACCGCACGGC CGACGCGGTC GAGCTTTGCA ACCGCATCTG TACGGCGCTG CACGCGCCGA TTTCGCTCGG CGAGACGCAG GTCGTGCCGG GATGCTCCGG CGGTCTGGCG CTGTATCCCA GCGCCGGACG GGCGGCGGAT GCGCTGTTCG ACCGGGCCGA TTATGCGCTC TACCATTCCA AGGAGCGCAA GCGCGGGACC ACGACCCTGT TCTCGCAGGA GCATGAGGAC GCGATCCGGG CCGAGCGCGC AGTGGAGGCC GCCCTCCAGA GTGCGGATCT CGCCGCCGAG ATGGAGATGC ACTACCAGCC GATCCTCGAC ACGGTGACAG ACCGCATCAC CACGGTCGAG GCGCTGGCGC GCTGGACGAG CCCCAAGCTC GGGCGCGTGC CGCCCGACCG CTTCATCGGC GTGGCGGAGC GCTGCGGCAT GATCCACTCG GTGACCCTGC TTCTCCTGCG CAAGGCGCTC GCCGACGCGG CCCGGCTTCC GGACGACATC GGACTATCGT TCAACCTCTC CTCGCACGAC CTTGCCTCGC CCGAGACGGT CATCGCGATC CTCGCCGCGG TCCGGCAGAG CGGGCTCGAT CCCCGACGGA TCACGCTGGA GCTGACGGAG ACCGCGCTGA TGCGCGACTT CGAGGGGGCG CAAAAGGCGA TCACGCTCCT GCGCGCACTC GGCATCAAGA TCGCGCTGGA CGATTTCGGG ACGGGGTATT CGAGCCTGAA CTACGTCCAC CGCCTGCCGC TCGACCGGAT CAAGATCGAC CGCGGCTTCA TGGCCGACGT CGAATCCGAC CTCGGGCGCA GCGTCGTGAT CACGATCCTC GATCTCTGCC AGAACCTCGG CCTGGACGGC ATCGCCGAGG GAATCGAGAC CACGGAGCAA TTGAGCGCGG TGCGCCGTCA CGGCTGTCGC TACGTTCAGG GCTACCTGAT CGGGGTGCCG ATGCCGATGA CGGACCTGCT CGGCGGCCTT CGCGGCACGG CGGAGGCCGA GCCGGTCTCC GCCTGA
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Protein sequence | MRMKFIYGRR ELLSGIVPSY TDPEACIRQI GELQKQIPSL YALLSVNACA LAFTHYPLAP AWLTVGLPGA MIGLCVVRAT HWWHLRPQSI SGEEAVKRLR GTSLLTVLFS ALFVGWAMKL TSYGGPFEQG HVAIFVAITV IACIFCLTHL PAAALVVTII VMGSFLIHCF TSGNSVFIAI ALNTAFVTVV MVRILTNNFL AFLQLLESKA EAQRLGEENQ RLAHTDSLTG LPNRRYFFQR LDALIAASAT GNAAFALAIF DLDRFKPIND TFGHTAGDRV LEETGRRLSA FAADGVTIAR LGGDEFGVLI HAADRTADAV ELCNRICTAL HAPISLGETQ VVPGCSGGLA LYPSAGRAAD ALFDRADYAL YHSKERKRGT TTLFSQEHED AIRAERAVEA ALQSADLAAE MEMHYQPILD TVTDRITTVE ALARWTSPKL GRVPPDRFIG VAERCGMIHS VTLLLLRKAL ADAARLPDDI GLSFNLSSHD LASPETVIAI LAAVRQSGLD PRRITLELTE TALMRDFEGA QKAITLLRAL GIKIALDDFG TGYSSLNYVH RLPLDRIKID RGFMADVESD LGRSVVITIL DLCQNLGLDG IAEGIETTEQ LSAVRRHGCR YVQGYLIGVP MPMTDLLGGL RGTAEAEPVS A
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