| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2270 |
|---|
| Symbol | |
|---|
| ID | 5833102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2517472 |
|---|
| End bp | 2518887 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641368069 |
|---|
| Product | ATPase domain-containing protein |
|---|
| Protein accession | YP_001639736 |
|---|
| Protein GI | 163851693 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.250434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAGT TGCTGATTCA GCTCGGCCTT CGCTTCGACG ATCCCCACGA GGAGCAGTCG
TTCGTGAGGA GCTTCACGCT CGACGATCTC GGCCGCACGC AGGCCGCGAT GGTGCTGGGC
GCTTTCGTCT TCTGCTCGTT CTCGGCCATG GACTGGATTC TCAGTCCCGA TGCCTGGGCC
ATCGCCACCG CGCTGCGGCT CGCCGTCGCC GTCCTGGTCC TGGTGCCGGC GACCCTCCTG
CTCAGCCGGC CGGACGCCCG GCCTTTCGCG GAATGGATCT ACCTCGTCTA CTGCGTCGTG
CCGGGCTGCA TGCTCAGCCT GATCTACGTC TTCCTGCGGC CGAGCTTCGA TCACGGTGCA
GCGGGGCTGA TCGTGGTGAT TCTGTTCGTC TCGACGCTGC TGCCGCTGCG GGTCTCCTCG
TTCGGAGTGT TCGCCGTCCT GACCTGGACC TGCTTTGCCC TGTTCGAGAC CATCGCGACG
CACGACAATC CCGGCTTGGC CCTCGTGAAC AATGCCGAGA TCGGCGCGGC CTACGCGCTC
TCGCTCTACG GGGTCGGGGC ACGGGAGTTT CGCGCGCGGC GCCAGTTCCG GACCACGGGG
GAGTTGCAGG TCGAGAAGGA GCGCTCGGAG GCGACCCTGG CCGAACTGCG CGCCGCCCAG
GCGCAACTGG TTCAGGCCGA GAAGCTCGCC GCGCTCGGCC AGCTCGTGGC GGGCGTGGCG
CACGAGATCA ACACACCCAT CGGCCTCGCG ATGACGACCT CGACGGCGTT CGACCACGAC
CTCGCCGAAC TTCGCCGCAC CGTCGCCTCG GGGCAGATCC GCCGGTCCGA CCTGACGCGG
AGCGTCGATC GGCTGAGCGA GGGCGCGGGT CTGGTCTTCG CCAACCTGAC GCGGGCCGCC
GATCTGGTTC AGAACTTCAA GCAGGTCGCG GTCGATCAGG CGACGGAGGA CCGGCGCCGC
TTCGAGATGC GCCCCTGGCT CACCGAGTTG ATGAGCACGC TCGATCCGAT CCTGCGGCGC
AAGGGCCACG AGGTCCGGCT CGCCTGTCCC GACGGCATCC TCCTCGATTC CTATCCCGGC
GCGCTGGCGC AGGTCGTCAG CAACCTCGCG CTCAACGCCG TGATCCACGC CTTTCCCGAG
GGCCGCACCG GCACGCTCCT CGTCGACGTG AGCCGGCTCG GCGACACGCA GATCCGGATG
ACGGTGCGGG ACGACGGACG CGGCATCCCG CCGGAGAACC GGCAGCGGAT CTTCGACCCG
TTCTTCACCA CCGGACGCGA CAAGGGCAGC ACCGGACTCG GCCTGCACAT CGTCTACAAT
CTCGTCGTCT CGACCCTGCG CGGGCAGATC GCCATCGACA GCGAGGAGGG GGTCGGGACA
GGGGTGACGA TCGACCTTCC CGTGACGGTG CCGTGA
|
|---|
| Protein sequence | MHKLLIQLGL RFDDPHEEQS FVRSFTLDDL GRTQAAMVLG AFVFCSFSAM DWILSPDAWA
IATALRLAVA VLVLVPATLL LSRPDARPFA EWIYLVYCVV PGCMLSLIYV FLRPSFDHGA
AGLIVVILFV STLLPLRVSS FGVFAVLTWT CFALFETIAT HDNPGLALVN NAEIGAAYAL
SLYGVGAREF RARRQFRTTG ELQVEKERSE ATLAELRAAQ AQLVQAEKLA ALGQLVAGVA
HEINTPIGLA MTTSTAFDHD LAELRRTVAS GQIRRSDLTR SVDRLSEGAG LVFANLTRAA
DLVQNFKQVA VDQATEDRRR FEMRPWLTEL MSTLDPILRR KGHEVRLACP DGILLDSYPG
ALAQVVSNLA LNAVIHAFPE GRTGTLLVDV SRLGDTQIRM TVRDDGRGIP PENRQRIFDP
FFTTGRDKGS TGLGLHIVYN LVVSTLRGQI AIDSEEGVGT GVTIDLPVTV P
|
|---|
| |