| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2227 |
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| Symbol | |
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| ID | 5834289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 2471735 |
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| End bp | 2474146 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641368026 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001639693 |
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| Protein GI | 163851650 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTATCC CGACCTCAGA CGCGTCCGCC GCCGCGCTGG TCCAGCATTG GCGCAGTTGC
CGGTCCCGCC CCGGGGCGAT GCCGGGTTAC GATGCCGTCG TCCTGGGCAG GCTCGGCCGT
CTGGCCGACC GCTGCGCCCT GGTCGCCACC CGCGAAGGCC GGGCCGAACG CATCCTCTGG
GGTGGCACGG GATTTCGCGA CTGGTTCGAG GACGAGATCC GCGACCGGCC GCTCGTGCAG
ATGCCCGATG AGATCCGCCG GCCGATCGAG GAGATCGGGG TCGCCGCCCT GCGCACCGGC
GAGCCGGCCG GGGCTCGATG CGACCGAATC ACCGACGGCG TCGTCACCAC CTGGAAGCTC
GTCGGCGTCC CGCTCGCCAA CGGCAGCGGA ACGCCGCTCC TCCTCGTCCA CGTCGCCAGC
GAGGGCGTGC GCACCGAGCT GATGCAGGCG ATGTTCGGCG CGACCGGCCA GGGCCTGATG
GCGCTCGGCG CGATCCGCGA GGCATCGGGT GCGGTCGCGG ACTTCAAGAT CGTCGCCCTC
AACCAGGGCG CCGCGGCGAT TCTCGGGCGG CCGGTCGCGA GCCTGCAATG GCAGCGGCTG
GGCGATCTCG TGCCCGTTCG GCTCGGCGTG ACACACCGTC TGTCGGGCGT CCTGGGATGC
GCCGACCGGG CGACGTTCGA ACTCGCCGTG CCGCGCGCCG ACCGGACGAC GCTGCATCTG
AAGGTGGAGG CGCAGGCCAT CGGCGATCTC GTCGCCGTCG CCATGACCGA TGTCGGGGAC
ATCAAGGCGC GCGAGGCCTC GTTCCGGTTC CTGTTCGAGA GCAATCCGCT GCCGATGTGG
CTGGTCGATC AGGATTCGGC CCGCTTCGTC GCCGTGAACG AGGCGGCGGT CGCCCATTAC
GGCTACAGCC GCGAAGCCTT CCTGGCCCGG GGCCTGCAGG ACCAGTCGGA AGCCGTCGCG
TTCAGTTTTG CCCGCGACGG CCGCCTGCAC CGCCATCGTC GGGCCGACGG CTCGTTGATC
GACGTGACGC TGTTCGAGCG CAGCCTCGCC TTCGAAGGTC GCCCGGCCGT GCTCGGCGCG
GCCATCGACG TCACCGAGCA GCGCCGTGCC GAGGCGCGCA TCACCCACAT GGCGCACCAC
GATGCGCTGA CAGGCCTGCC GAACCGGGCG CTGTTCACGA CCCGCCTCGC GGAGGCGATT
ACCGAGCATG CCCGCACCGG CGCGGGCGCC GCCCTGCTCT GCCTCGACCT CGACAAGTTC
AAGCTCGTCA ACGACACCCT CGGCCACCCG GCGGGCGACA CCCTGCTCCG AGCGGTGGCG
GACCGGATCA CGGCATGCCT GCACGGGGAG GATCTGGTCG CGCGCCTCGG CGGCGACGAG
TTCGCGGTTC TGCTGCGTAC CCCCGACGCC GGGACCGTGT CCGCCGTCGC CGGCCGGATC
ATCGAGGCGT TGTCACACCC CGTCAGGCTC GGCGACCGGG AATGCCAGAT CGGCGTGAGC
GTCGGCATCG CCTGCCTGCC CGAACACGGA ACCGATTCCG ATACCCTGCT GCGGCATGCC
GACCTCGCTC TCTACCGGGC GAAGGCGGAT GGCGGCAGCA TCGCCCATTG TTTCGAGGCG
GCGATGGACA GTTGGGACCG GTCCCGACGC CGACGGGAGG CCGACCTGCA CGAGGCCTTC
GCCCGGGGCG ATCTCGCGCT CGCCTACCAG CCGGTCGTGG GCGTCCGCTC GCGGGCGATC
GTCGGGTTCG AGGCGCTGCT GCGCTGGCAC CACCCGGTCG AGGGAGCGAT CCCGCCGTCT
GAATTCGTGC CGCTGGCCGA GGAAACGGGC CTGATCGTGC CGATCGGCGC CTGGGTGCTG
CGACAAGCCT GCGCCGAGGC GAGCCTGTGG GCCGATCCGG TTCGGATCGC GGTGAACCTC
TCGCCGGTGC AGTTCCGCGA TCCCGGCCTC GTCGCGACGG TGCGCGAGGC GCTCGCCTTT
TCCGGGCTCG CCCCGCACCG GCTCGAACTG GAGGTCACAG AATCGGTGCT GCTGGCCGCG
AGCGAGGCCA ACGTCGCTAC GCTGCATGCC CTGCGGGATC TCGGCGTACG GATTGCGATG
GACGATTTCG GAACGGGCTA TTGCTCGTTG AGCTACCTGC AGAAGTTTCC CTTCGACAAG
ATCAAGATCG ACCGCTCGTT CGTAAGCCGG CTCGGCGAGG ATCCGCACTC GACCGCGATC
GTGCAGGCGG TGATCGGCCT CGGCGCAAGC CTCGGCATCG TCACCGTGGC CGAGGGTGTC
GAGACCGAAG TCCAGTTCGC CCATCTGCGG GCCGAGGGCT GCGAGGAGGT GCAGGGCTAC
CTGTTCGGTC GGCCAATCCC CGCACCGCAG GCCGTCGCGC CGATTCGGCG GGAGCCGGAC
GTCGCCGCGT GA
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| Protein sequence | MPIPTSDASA AALVQHWRSC RSRPGAMPGY DAVVLGRLGR LADRCALVAT REGRAERILW
GGTGFRDWFE DEIRDRPLVQ MPDEIRRPIE EIGVAALRTG EPAGARCDRI TDGVVTTWKL
VGVPLANGSG TPLLLVHVAS EGVRTELMQA MFGATGQGLM ALGAIREASG AVADFKIVAL
NQGAAAILGR PVASLQWQRL GDLVPVRLGV THRLSGVLGC ADRATFELAV PRADRTTLHL
KVEAQAIGDL VAVAMTDVGD IKAREASFRF LFESNPLPMW LVDQDSARFV AVNEAAVAHY
GYSREAFLAR GLQDQSEAVA FSFARDGRLH RHRRADGSLI DVTLFERSLA FEGRPAVLGA
AIDVTEQRRA EARITHMAHH DALTGLPNRA LFTTRLAEAI TEHARTGAGA ALLCLDLDKF
KLVNDTLGHP AGDTLLRAVA DRITACLHGE DLVARLGGDE FAVLLRTPDA GTVSAVAGRI
IEALSHPVRL GDRECQIGVS VGIACLPEHG TDSDTLLRHA DLALYRAKAD GGSIAHCFEA
AMDSWDRSRR RREADLHEAF ARGDLALAYQ PVVGVRSRAI VGFEALLRWH HPVEGAIPPS
EFVPLAEETG LIVPIGAWVL RQACAEASLW ADPVRIAVNL SPVQFRDPGL VATVREALAF
SGLAPHRLEL EVTESVLLAA SEANVATLHA LRDLGVRIAM DDFGTGYCSL SYLQKFPFDK
IKIDRSFVSR LGEDPHSTAI VQAVIGLGAS LGIVTVAEGV ETEVQFAHLR AEGCEEVQGY
LFGRPIPAPQ AVAPIRREPD VAA
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