Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2184 |
Symbol | rpsE |
ID | 5832446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 2436855 |
End bp | 2437433 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641367982 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_001639650 |
Protein GI | 163851607 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.357702 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGTG AACGCGAGGG TCGTCGCCGC GACGACCGCG AGGAGCGCGA CAGCGAGTTC GTGGACAAGC TCGTCCACAT CAACCGCGTC GCCAAGGTGG TGAAGGGTGG CCGTCGCTTC GGCTTCGCGG CGCTCGTCGT CGTCGGCGAC CAGAAGGGCC GCGTCGGCTT CGGCCACGGC AAGGCCCGTG AGGTGCCGGA GGCAATCCGC AAGGCAACCG AGGCCGCCAA GCGCGGTCTG ATCCGGGTGT CGCTGCGCGA AGGCCGCACC CTGCACCACG ACGTCAACGG TCGCCACGGC GCCGGCAAGG TGATCCTCCG CGCTGCTCCG CAGGGCACGG GCATCATCGC CGGCGGCCCG ATGCGCGCCG TGTTCGAGAC GCTCGGCATG CAGGACGTCG TCGCCAAGTC GCTCGGCTCG TCCAACCCCT ACAACCTCGT GCGCGCCACC TTCGACGCGC TCAAGAACGA GGACAGCCCG CGCTCGGTCG CGGCCCGTCG CGGTCTCAAG GTGTCGGCCC TCCAGGCCCG TCGCCGTGAC GCCGACCCGG CCGACACCTC CGAAGCGGCC GTCGCGTAA
|
Protein sequence | MAREREGRRR DDREERDSEF VDKLVHINRV AKVVKGGRRF GFAALVVVGD QKGRVGFGHG KAREVPEAIR KATEAAKRGL IRVSLREGRT LHHDVNGRHG AGKVILRAAP QGTGIIAGGP MRAVFETLGM QDVVAKSLGS SNPYNLVRAT FDALKNEDSP RSVAARRGLK VSALQARRRD ADPADTSEAA VA
|
| |