| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2160 |
|---|
| Symbol | |
|---|
| ID | 5831454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2419741 |
|---|
| End bp | 2420931 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641367958 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_001639626 |
|---|
| Protein GI | 163851583 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.448511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAGG AAAAGTTCTC CCGTACCAAG CCGCACTGCA ACATCGGCAC GATCGGGCAC
GTGGATCACG GCAAGACGTC GCTGACGGCG GCGATCACGA AGGTTCTGGC GGAGTCGGGC
GGGGCGACCT TCACGGCCTA CGACCAGATC GACAAGGCGC CGGAAGAGAA GGCGCGCGGC
ATCACGATCT CGACCGCCCA CGTCGAGTAC GAGACGACCA ACCGCCACTA CGCGCACGTC
GACTGCCCCG GCCACGCCGA CTACGTGAAG AACATGATCA CCGGTGCCGC CCAGATGGAC
GGCGCGATCC TGGTCGTGTC CGCCGCCGAC GGCCCGATGC CGCAGACCCG CGAGCACATC
CTGCTCGCCC GTCAGGTCGG CGTGCCGGCG CTGGTGGTGT TCCTCAACAA GGTCGACATG
GTCGATGACG AGGAGCTCCT GGAGCTGGTC GAGCTGGAGG TGCGCGAGCT TCTCTCGAAG
TACGACTTCC CCGGCGACGA CATCCCGATC ACCAAGGGCT CGGCCCTGAT GGCGCTCGAG
GACAAGGAGC CCAAGATCGG CAAGGAAGCC GTTCTGGCGC TGATGGCGAC CGTGGACGAG
TACATCCCGC AGCCGGAGCG TCCGATCGAC ATGCCGTTCC TGATGCCGAT CGAGGACGTG
TTCTCGATCT CGGGCCGCGG CACGGTGGTG ACCGGTCGCG TCGAGCGCGG CATCGTCAAG
GTCGGCGAGT CGGTGGAGAT CGTCGGCATC CGTCCGACGA CGACGACGAC GGTGACCGGC
GTCGAGATGT TCCGCAAGCT GCTCGACCAG GGTCAGGCGG GCGACAACGT CGGCGTGCTG
CTGCGCGGCA CGAAGCGCGA GGACGTGGAG CGCGGCCAGG TCGTGTGCAA GCCGGGTTCG
GTGAAGCCGC ACTCGAAGTT CAAGGCCGAG GCCTACATCC TGACGAAGGA AGAGGGCGGC
CGCCACACGC CGTTCTTCAC CAACTACCGC CCGCAGTTCT ACTTCCGCAC GACGGACGTG
ACCGGCGTGT GCACGCTGCC CGAGGGCACC GAGATGGTGA TGCCGGGCGA CAACGTGACC
ATGGACGTGG TGCTGATCGT GCCGGTGGCC ATGGAAGAGA AGCTGCGCTT CGCCATCCGC
GAGGGTGGTC GCACCGTCGG TGCCGGCGTC GTCGCCGCCA TCAACGACTA A
|
|---|
| Protein sequence | MGKEKFSRTK PHCNIGTIGH VDHGKTSLTA AITKVLAESG GATFTAYDQI DKAPEEKARG
ITISTAHVEY ETTNRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI
LLARQVGVPA LVVFLNKVDM VDDEELLELV ELEVRELLSK YDFPGDDIPI TKGSALMALE
DKEPKIGKEA VLALMATVDE YIPQPERPID MPFLMPIEDV FSISGRGTVV TGRVERGIVK
VGESVEIVGI RPTTTTTVTG VEMFRKLLDQ GQAGDNVGVL LRGTKREDVE RGQVVCKPGS
VKPHSKFKAE AYILTKEEGG RHTPFFTNYR PQFYFRTTDV TGVCTLPEGT EMVMPGDNVT
MDVVLIVPVA MEEKLRFAIR EGGRTVGAGV VAAIND
|
|---|
| |