Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2149 |
Symbol | |
ID | 5835617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 2405676 |
End bp | 2406350 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641367947 |
Product | HAD family hydrolase |
Protein accession | YP_001639615 |
Protein GI | 163851572 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.376936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCG AAACTGTCTT CCTGTTCGAT CTCGACGGCA CGCTGGTCGA CAGCGTCTAC CAGCACCTGC TCGCCTGGAA GGAGGCGCTC GACGCGGAGG GGATTCCGCT TTCGGTGTGG CGCATCCACC GCAAGATCGG GATGAGCGGG GGCCTGTTCA CCAACCAGCT CCTGCGCGAG ACCGGGCTCG CCATCGATCC GGATCGGATC GACCGGCTGC GGCGGCTGCA CGCGGAGGCC TATGGCCGGC TGTCGAAAGG CGTGGTGCCG CTGCCGGGAG CCAGGGAACT GCTCGCCACG CTGACCGAGA ACCGCATCCC CTGGGCCATC GCCACCAGCG GGCGGATGGA GACCGCCGGC CACAACCTCG TGGCGCTCGG CGTCGATCCC GAACAGGTGC CGGTGGTGAC GCGGGACCTC GTGAAATACG CCAAGCCCGA TCCGGACCTG TTCCTCGCCG CCGCCGCGCG GCTGAACGCA CCGATCGAGC ACGCGGTGAT CGTCGGCGAT TCGATCTGGG ACATGCTGGC GGCCCGCCGC TGCCGCGGGC TCGGGGTCGG CCTGCTCTCG GGTGGATACG GCACGGAAGA GCTCGAACGC TCCGGCGCGG TCAGGGTCTA CGACGACCCC GCGATGCTTC TGGAACACCT CGACGAAGTC GGTGGCCGAC GCTGA
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Protein sequence | MRIETVFLFD LDGTLVDSVY QHLLAWKEAL DAEGIPLSVW RIHRKIGMSG GLFTNQLLRE TGLAIDPDRI DRLRRLHAEA YGRLSKGVVP LPGARELLAT LTENRIPWAI ATSGRMETAG HNLVALGVDP EQVPVVTRDL VKYAKPDPDL FLAAAARLNA PIEHAVIVGD SIWDMLAARR CRGLGVGLLS GGYGTEELER SGAVRVYDDP AMLLEHLDEV GGRR
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