Gene Mext_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2149 
Symbol 
ID5835617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2405676 
End bp2406350 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID641367947 
ProductHAD family hydrolase 
Protein accessionYP_001639615 
Protein GI163851572 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.376936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG AAACTGTCTT CCTGTTCGAT CTCGACGGCA CGCTGGTCGA CAGCGTCTAC 
CAGCACCTGC TCGCCTGGAA GGAGGCGCTC GACGCGGAGG GGATTCCGCT TTCGGTGTGG
CGCATCCACC GCAAGATCGG GATGAGCGGG GGCCTGTTCA CCAACCAGCT CCTGCGCGAG
ACCGGGCTCG CCATCGATCC GGATCGGATC GACCGGCTGC GGCGGCTGCA CGCGGAGGCC
TATGGCCGGC TGTCGAAAGG CGTGGTGCCG CTGCCGGGAG CCAGGGAACT GCTCGCCACG
CTGACCGAGA ACCGCATCCC CTGGGCCATC GCCACCAGCG GGCGGATGGA GACCGCCGGC
CACAACCTCG TGGCGCTCGG CGTCGATCCC GAACAGGTGC CGGTGGTGAC GCGGGACCTC
GTGAAATACG CCAAGCCCGA TCCGGACCTG TTCCTCGCCG CCGCCGCGCG GCTGAACGCA
CCGATCGAGC ACGCGGTGAT CGTCGGCGAT TCGATCTGGG ACATGCTGGC GGCCCGCCGC
TGCCGCGGGC TCGGGGTCGG CCTGCTCTCG GGTGGATACG GCACGGAAGA GCTCGAACGC
TCCGGCGCGG TCAGGGTCTA CGACGACCCC GCGATGCTTC TGGAACACCT CGACGAAGTC
GGTGGCCGAC GCTGA
 
Protein sequence
MRIETVFLFD LDGTLVDSVY QHLLAWKEAL DAEGIPLSVW RIHRKIGMSG GLFTNQLLRE 
TGLAIDPDRI DRLRRLHAEA YGRLSKGVVP LPGARELLAT LTENRIPWAI ATSGRMETAG
HNLVALGVDP EQVPVVTRDL VKYAKPDPDL FLAAAARLNA PIEHAVIVGD SIWDMLAARR
CRGLGVGLLS GGYGTEELER SGAVRVYDDP AMLLEHLDEV GGRR