| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2093 |
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| Symbol | |
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| ID | 5833183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 2336156 |
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| End bp | 2337172 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641367891 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001639560 |
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| Protein GI | 163851517 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.541831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0719668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAGG CTACTCTCAG CCGTCGGCGC CTCGTCGCGG GCGCGGCCGC CCTTCCCCTG
TTCGGCATCC TGACGCGGCG CGCCGCGGCG GCCGAGTTCG TCTACAAGCT GGCGACCGGG
CAGGATCCGA ACCATCCCGT CAACATCCGC GCGCAGCAGG CGATCGACCG GATCCGCGAG
GCGAGCAGCG GACGTCTGGA GATCCGGCTG TTCCCGGCCA ACCAGCTCGG GGCCGACACC
GACCTGCTCG CCCAGGTGCG CAGCGGCGCC GTCGAGTTCC TGAACCTGTC TGCCTCGGTC
CTGGCGACCT TCCTGCCGGT GGCGAGCCTG ACCAATCTCG GCTTCGTCTT CAAGGATTAC
GACAGCGTCT GGGCCGCCAC CGACGGTCCG CTCGGCGCCT ATGTCCGCGA GCAGATCGGG
CGCACGCCGA TCCTCACCGT GTCGAAGGCC TGGGACAACG GCTTCCGTCA CGTCACCTCC
TCGACGCAGG AGATCCGCAC GCCGGACGAC ATCCGCGGCT TCAAGATCCG CGTGCCGCAG
GCGCCGATGC AGACGTCGCT GTTCCGGGCC CTGGAGGCGG GGGCGACGCC GATCAACTTC
AACGAGCTGT ACTCGGCCCT GCAGACCAAG GTGGTCGAGG GCCAGGAGAA CCCGCTCCCG
ATCACCGCGA CGACGCGGAT CTACGAGGTC CAGAAGAGCT GCAGCCTGAC CGGGCACATC
TGGGACGCCT ACTGGATTCT CGGCAATCGC CGCGCCTGGG CCCGCCTGCC CGAGGATCTG
CGGATGATCG TCGGGCGCGA ACTCGACCGC TCCGCCGACG ACGAGCGCGC CGACAGCGTG
GCGCTCAACG CGAACCTGCG CACCACGCTC GCGGCCAAGG GCCTGACCTT CGTCGACGTC
GATCGGGACG CGTTCCGCGA CGCCCTGGTC CGGACCAGCT TCTACCGGGA CTGGAAAGCC
AAGCTCGGGC CGACGGCCTG GGACCATCTC GAGAGCGTCA CCGGAAAGCT CGTGTGA
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| Protein sequence | MPEATLSRRR LVAGAAALPL FGILTRRAAA AEFVYKLATG QDPNHPVNIR AQQAIDRIRE
ASSGRLEIRL FPANQLGADT DLLAQVRSGA VEFLNLSASV LATFLPVASL TNLGFVFKDY
DSVWAATDGP LGAYVREQIG RTPILTVSKA WDNGFRHVTS STQEIRTPDD IRGFKIRVPQ
APMQTSLFRA LEAGATPINF NELYSALQTK VVEGQENPLP ITATTRIYEV QKSCSLTGHI
WDAYWILGNR RAWARLPEDL RMIVGRELDR SADDERADSV ALNANLRTTL AAKGLTFVDV
DRDAFRDALV RTSFYRDWKA KLGPTAWDHL ESVTGKLV
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