Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2091 |
Symbol | |
ID | 5833177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2334117 |
End bp | 2334977 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641367889 |
Product | transketolase domain-containing protein |
Protein accession | YP_001639558 |
Protein GI | 163851515 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3959] Transketolase, N-terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.189394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCACC CCCCCGAGAT CCACCCCCGC GAAGGCTCGA ACGTCTCGCT CGACGACCGC GCCTACCGCA TCCGCCGCCA CGCCCTGCTG ATGGGCGAGG TCCAGGGCCA GGGCTACATC GCCCAGGCGC TCGGCATCAG CGACGTGCTG GCGGTCAGCT ACTTCCACGC CATGACCTAC CGGCCCGACG ATCCGGAATG GGAGGGCCGG GACCGCTTCC TGCTCTCGAT CGGCCACTAC GCCATCGCCC TCTACGCCGC GCTGATCGAG GCCGGCATCA TCCCGGAGGA CGAACTCGGG ACCTATGGCA GCGACGACAG CCGCCTGCCG ATGTCCGGTA TGGCCGCCTA CACGCCCGGC ATGGAGATCA CCGGCGGCTC CCTCGGCCAC GGGCTCGGCA TCGCCGTCGG GATGGCGCTC GGCCTCAAGC GCAAGGCCTC GACCGCCTTC GTCTACAACC TGTTCTCCGA CGGCGAACTC GATGAGGGCT CGACCTGGGA GGCGGCGATG TCGGCGGCGA GCTTCGGGCT CGACAACCTG ATCGGCATCG TCGACGTCAA CGGCATGCAG GCCGACGGGC CGTCCCGCGG CGTCCTGAAC TTCGAGCCGC TCGCGCCGAA GTTCGAGGCC TTCGGCTGGT TCGTCCAGCG GGTGGACGGC AACGACATCG ACGCCCTGGT GAAGGCCTTC GACGCCGCCC GGTCCCATCC GGAGCCCTGC CCGCGCATCA TCATCTGCGA CACCAAGATG GCCAAGGGCG TGCCCTTCCT CGAGGCGCGC GAGCGCAATC ACTTCCTGCG GGTCGAGGCG GACGAGTGGC GCCAAGCCCT GGCGGTTCTG GACGAAGGGA GGCTCCCATG A
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Protein sequence | MVHPPEIHPR EGSNVSLDDR AYRIRRHALL MGEVQGQGYI AQALGISDVL AVSYFHAMTY RPDDPEWEGR DRFLLSIGHY AIALYAALIE AGIIPEDELG TYGSDDSRLP MSGMAAYTPG MEITGGSLGH GLGIAVGMAL GLKRKASTAF VYNLFSDGEL DEGSTWEAAM SAASFGLDNL IGIVDVNGMQ ADGPSRGVLN FEPLAPKFEA FGWFVQRVDG NDIDALVKAF DAARSHPEPC PRIIICDTKM AKGVPFLEAR ERNHFLRVEA DEWRQALAVL DEGRLP
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