| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2014 |
|---|
| Symbol | |
|---|
| ID | 5831527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2246053 |
|---|
| End bp | 2247189 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641367814 |
|---|
| Product | peptidase M48 Ste24p |
|---|
| Protein accession | YP_001639483 |
|---|
| Protein GI | 163851440 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.700955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCGA TCACCACGAC CGGCACGTTC TTCGACGGCC TCAGCGCCCG GCCCCAGCCG
GTGACGCTGA GGCTGACGTT CCGGCTCGAA GTCTCCGGCG AGGATGTTTT TCGCGATTGG
AGTCTGCTCG ACCTGCGCGC CGCCGACGCC GCCCCGCCCC TGATGCGGAT CAACCACGCG
CAGGGATCGG AGAGCGTCGA GTTCGCCGAC GCCGCGTTCG CGGAAGCCCT GAAGGCGCGA
TGTCCCGACC TGAACCGAAC CGAGAGCGGA GGCGGCCTCA CCCGTCTCGT GCTCTGGTCG
ATCGCAGCGG GCGTCTCCGT GCTGCTGACG GCCGTCTACG GTGTCCCGGC CGCCTCGAAC
CTGCTCGCCC CCTTGGTCCC GCAGGCGATC GAAGCGCAAC TCGGGCGCAG CGTCGATACC
CAGATCGTCG GCCTGCTCGG CGACCCGCCG CTCTGCAACG AGGCGGCGGG GCGTGCGGTG
CTCGACCGGC TGACGGCGCG GCTTGCCGAG GGCATGGCGC TTCCGGCGAC GCCACAGGTC
AGCGTGCGCC AACACAAGGT TGCCAACGCG CTTGCCCTGC CGGGCGGCCG GGTGATCCTG
CTCTCCGACA TCCTCGCCAA GGCCAAAAGT GGCGATGAGT TGGCCGGCAT CCTCGCGCAC
GAGTTCGGCC ACATCGCCGC CCGCGATCCG ATGCGCTCGG TGATCACGGC CGGCGGCACG
TCGTTCCTGT TGAGCCTCGT GCTCGGCGAT CTCACCGGCT CGACGGTGCT GGTGACGATC
GGGCAGGCGG CGATTTCGGC GGGCTACTCA CGCGATGCGG AGCGGACGGC GGACGCCTAC
GCGGTGGCGG CGGTGAAGCG GGCCGGCGGG GACGGGGCCG CACTTGCCGC GATCCTGGAG
CGCATCACCG ATGCAGACGA CGAGAAGCCG GACGCGACCT CGTTCCTCCG CTCCCATCCG
GTCACGGCGG AGCGGGCCGC GCGGATCCGG TCACTGGCGG GGGAGAAGCC GGCCGGCCCC
GGCATCCTGT CCGAAGCCGA GTGGCAGAGC CTCCAGGGCA TCTGCCCGAA GCCGGCCAAA
CCGGAAAAGA CCAAGCCGGA CGACAAGGAC ACCAAGCCGC CGACCGAGAA GCTGTAG
|
|---|
| Protein sequence | MEAITTTGTF FDGLSARPQP VTLRLTFRLE VSGEDVFRDW SLLDLRAADA APPLMRINHA
QGSESVEFAD AAFAEALKAR CPDLNRTESG GGLTRLVLWS IAAGVSVLLT AVYGVPAASN
LLAPLVPQAI EAQLGRSVDT QIVGLLGDPP LCNEAAGRAV LDRLTARLAE GMALPATPQV
SVRQHKVANA LALPGGRVIL LSDILAKAKS GDELAGILAH EFGHIAARDP MRSVITAGGT
SFLLSLVLGD LTGSTVLVTI GQAAISAGYS RDAERTADAY AVAAVKRAGG DGAALAAILE
RITDADDEKP DATSFLRSHP VTAERAARIR SLAGEKPAGP GILSEAEWQS LQGICPKPAK
PEKTKPDDKD TKPPTEKL
|
|---|
| |