| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1978 |
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| Symbol | |
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| ID | 5831774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 2211040 |
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| End bp | 2211936 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641367779 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001639448 |
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| Protein GI | 163851405 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.148602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACATCG TCATCGTGGA TTCGAGCCGT GTCGTTCTAC GGATCGTGGC CGGCATGCTC
GAACCGCGGG GTCATGTGGT GACGCAGTTC ACGGATTCCG GTGAGGCGCT GGCCTACATC
ACCGACAATC CGAAGGTCCG GGCCCTGATC ACGAGCCTGG AAGTCCGTCC GTTGAGCGGA
TTGGAACTGT GCTGGTCGGC CCGCCTGCTG TCCGAGTCGA GCCGTCCGCT CTCGATCATC
GCCATGTCCT CGGCCCGCAA CGCCCGCAAC CTCGCCGAGG CTCTCGACAG CGGCGCCGAC
GACTTCATCG ACAAGCCGCC GGGCGCCGAG GAATTGCAGG CGCGCATGCG GGCAGCCGAG
CGCCTCACCA CGCTCCAGAG CGACCTGATC CGGCTCGCCG AGACCGATTC GCTCACCGGC
CTGCTCAACC GCCGCGCCTT CCTGCAGCGC ACACGGGAAG CCGCCCAGAA GGCCGGGTCG
TTCGGGCATC TCTGCGCCGT GATCCTCGAC ATCGACCATT TCAAGCGCAT CAACGACGAG
CACGGCCACG ATGTCGGCGA CGCCGCCATC AAGGCCGTGG CGGGGATGAT CGAGGCGGAG
GGCATCGCCG GGCGCCTGGG CGGAGAGGAA TTCGCGGTGA TGCTCGCCGG TCAGCGTCTC
ACGGAGGCCG AGGCGGTCGC TTCCCGCCTG CGCCTCAAGA CCTCCGACCT GCGCATCCGT
TCGACCAAGG GACCGGTGCG GCTCACCTGC AGCTTCGGCG TGAGCGAATG GTCCGAGGGC
GAGACCGTCG AGGGCCTTCT GAAGCGGGCC GACATCGCCC TGTACGAAGC CAAGACGACG
GGCCGCAATC GCGTGGTCTC GGCGATGTCC GACCTCATCC TGTCCCGGAC CGCGTGA
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| Protein sequence | MHIVIVDSSR VVLRIVAGML EPRGHVVTQF TDSGEALAYI TDNPKVRALI TSLEVRPLSG
LELCWSARLL SESSRPLSII AMSSARNARN LAEALDSGAD DFIDKPPGAE ELQARMRAAE
RLTTLQSDLI RLAETDSLTG LLNRRAFLQR TREAAQKAGS FGHLCAVILD IDHFKRINDE
HGHDVGDAAI KAVAGMIEAE GIAGRLGGEE FAVMLAGQRL TEAEAVASRL RLKTSDLRIR
STKGPVRLTC SFGVSEWSEG ETVEGLLKRA DIALYEAKTT GRNRVVSAMS DLILSRTA
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